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SS1G_06090 hypothetical protein [ Sclerotinia sclerotiorum 1980 UF-70 ]

Gene ID: 5489149, updated on 16-Nov-2023

Summary

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Gene symbol
SS1G_06090
Gene description
hypothetical protein
Locus tag
SS1G_06090
Gene type
protein coding
RNA name
hypothetical protein
RefSeq status
PROVISIONAL
Organism
Sclerotinia sclerotiorum 1980 UF-70 (strain: 1980)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Leotiomycetes; Helotiales; Sclerotiniaceae; Sclerotinia
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Genomic context

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See SS1G_06090 in Genome Data Viewer
Location:
chromosome: Unknown
Exon count:
3

NW_001820829.1Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_001820829.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ATP hydrolysis activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ATP-dependent peptidase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables metalloendopeptidase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in mitochondrion organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein quality control for misfolded or incompletely synthesized proteins IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in mitochondrial inner membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Names
hypothetical protein

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NW_001820829.1 Reference assembly

    Range
    1328802..1331245
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_001593118.1 → XP_001593168.1  hypothetical protein SS1G_06090 [Sclerotinia sclerotiorum 1980 UF-70]

    See identical proteins and their annotated locations for XP_001593168.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A1D9Q435, A7EL93
    Conserved Domains (3) summary
    TIGR01241
    Location:281 → 718
    FtsH_fam; ATP-dependent metalloprotease FtsH
    pfam00004
    Location:333 → 463
    AAA; ATPase family associated with various cellular activities (AAA)
    pfam01434
    Location:543 → 718
    Peptidase_M41; Peptidase family M41
Nucleotide Protein
Heading Accession and Version

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