U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

SS1G_06724 hypothetical protein [ Sclerotinia sclerotiorum 1980 UF-70 ]

Gene ID: 5488366, updated on 16-Nov-2023

Summary

Go to the top of the page Help
Gene symbol
SS1G_06724
Gene description
hypothetical protein
Locus tag
SS1G_06724
Gene type
protein coding
RNA name
hypothetical protein
RefSeq status
PROVISIONAL
Organism
Sclerotinia sclerotiorum 1980 UF-70 (strain: 1980)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Leotiomycetes; Helotiales; Sclerotiniaceae; Sclerotinia
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See SS1G_06724 in Genome Data Viewer
Location:
chromosome: Unknown
Exon count:
1

NW_001820828.1Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NW_001820828.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in mRNA splicing, via spliceosome IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of post-mRNA release spliceosomal complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Names
hypothetical protein

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NW_001820828.1 Reference assembly

    Range
    1094164..1096188 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_001592433.1 → XP_001592483.1  hypothetical protein SS1G_06724 [Sclerotinia sclerotiorum 1980 UF-70]

    See identical proteins and their annotated locations for XP_001592483.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A1D9QIE2, A7EN25
    Conserved Domains (2) summary
    pfam04676
    Location:565 → 668
    CwfJ_C_2; Protein similar to CwfJ C-terminus 2
    cl00228
    Location:430 → 556
    HIT_like; HIT family: HIT (Histidine triad) proteins, named for a motif related to the sequence HxHxH/Qxx (x, a hydrophobic amino acid), are a superfamily of nucleotide hydrolases and transferases, which act on the alpha-phosphate of ribonucleotides. On the basis ...
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases
Research Materials