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SS1G_08964 hypothetical protein [ Sclerotinia sclerotiorum 1980 UF-70 ]

Gene ID: 5486266, updated on 16-Nov-2023

Summary

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Gene symbol
SS1G_08964
Gene description
hypothetical protein
Locus tag
SS1G_08964
Gene type
protein coding
RNA name
hypothetical protein
RefSeq status
PROVISIONAL
Organism
Sclerotinia sclerotiorum 1980 UF-70 (strain: 1980)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Leotiomycetes; Helotiales; Sclerotiniaceae; Sclerotinia
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Genomic context

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See SS1G_08964 in Genome Data Viewer
Location:
chromosome: Unknown
Exon count:
2

NW_001820824.1Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_001820824.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables iron ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables oxidoreductase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in lipid biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Names
hypothetical protein

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NW_001820824.1 Reference assembly

    Range
    790766..791878
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_001590150.1 → XP_001590200.1  hypothetical protein SS1G_08964 [Sclerotinia sclerotiorum 1980 UF-70]

    See identical proteins and their annotated locations for XP_001590200.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A1D9QL57, A7EUF7
    Conserved Domains (2) summary
    COG3000
    Location:70 → 330
    ERG3; Sterol desaturase/sphingolipid hydroxylase, fatty acid hydroxylase superfamily [Lipid transport and metabolism]
    pfam04116
    Location:170 → 297
    FA_hydroxylase; Fatty acid hydroxylase superfamily
Nucleotide Protein
Heading Accession and Version

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