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SS1G_09627 hypothetical protein [ Sclerotinia sclerotiorum 1980 UF-70 ]

Gene ID: 5485187, updated on 16-Nov-2023

Summary

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Gene symbol
SS1G_09627
Gene description
hypothetical protein
Locus tag
SS1G_09627
Gene type
protein coding
RNA name
hypothetical protein
RefSeq status
PROVISIONAL
Organism
Sclerotinia sclerotiorum 1980 UF-70 (strain: 1980)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Leotiomycetes; Helotiales; Sclerotiniaceae; Sclerotinia
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Genomic context

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See SS1G_09627 in Genome Data Viewer
Location:
chromosome: Unknown
Exon count:
5

NW_001820822.1Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_001820822.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ubiquitin binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in proteasome-mediated ubiquitin-dependent protein catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in ubiquitin recycling IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Names
hypothetical protein

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NW_001820822.1 Reference assembly

    Range
    41974..44185 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_001588944.1 → XP_001588994.1  hypothetical protein SS1G_09627 [Sclerotinia sclerotiorum 1980 UF-70]

    See identical proteins and their annotated locations for XP_001588994.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A1D9PRF4, A7EWB8
    Conserved Domains (4) summary
    COG2319
    Location:301 → 593
    WD40; WD40 repeat [General function prediction only]
    cd00200
    Location:283 → 548
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
    pfam12937
    Location:131 → 176
    F-box-like; F-box-like
    sd00039
    Location:365 → 400
    7WD40; WD40 repeat [structural motif]
Nucleotide Protein
Heading Accession and Version

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