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LOC547864 phosphoinositide-specific phospholipase C P13 [ Glycine max (soybean) ]

Gene ID: 547864, updated on 7-Dec-2023

Summary

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Gene symbol
LOC547864
Gene description
phosphoinositide-specific phospholipase C P13
Locus tag
GLYMA_14G059200v4
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Glycine max
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Glycine; Glycine subgen. Soja
Annotation information
Annotation category: partial on reference assembly
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Genomic context

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See LOC547864 in Genome Data Viewer
Location:
chromosome: 14
Exon count:
9
Annotation release Status Assembly Chr Location
104 current Glycine_max_v4.0 (GCF_000004515.6) 14 NC_038250.2 (4704030..4708769, complement)
103 previous assembly Glycine_max_v2.1 (GCF_000004515.5) 14 NC_038250.1 (4790214..4794953, complement)

Chromosome 14 - NC_038250.2Genomic Context describing neighboring genes Neighboring gene CTD nuclear envelope phosphatase 1 homolog Neighboring gene putative serine/threonine-protein kinase-like protein CCR3 Neighboring gene phosphoinositide-specific phospholipase C P12 Neighboring gene phosphoinositide phospholipase C 6

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables phosphatidylinositol phospholipase C activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in lipid metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in phosphatidylinositol-mediated signaling IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
phosphoinositide-specific phospholipase C P13

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001248381.2 → NP_001235310.1  phosphoinositide-specific phospholipase C P13

    See identical proteins and their annotated locations for NP_001235310.1

    Status: VALIDATED

    Source sequence(s)
    BI316627, FK449417, GR835755, U41474
    UniProtKB/TrEMBL
    Q43439, Q43443
    Conserved Domains (1) summary
    PLN02222
    Location:3 → 598
    PLN02222; phosphoinositide phospholipase C 2

RefSeqs of Annotated Genomes: Glycine max Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Glycine_max_v4.0 Primary Assembly

Genomic

  1. NC_038250.2 Reference Glycine_max_v4.0 Primary Assembly

    Range
    4704030..4708769 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

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Molecular Biology Databases