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HCAG_05000 transketolase 1 [ Histoplasma mississippiense (nom. inval.) ]

Gene ID: 5445920, updated on 17-May-2024

Summary

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Gene symbol
HCAG_05000
Gene description
transketolase 1
Primary source
FungiDB:HCAG_05000
Locus tag
HCAG_05000
See related
VEuPathDB:HCAG_05000
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Histoplasma mississippiense (nom. inval.) (strain: NAm1)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Eurotiomycetes; Eurotiomycetidae; Onygenales; Ajellomycetaceae; Histoplasma; unclassified Histoplasma
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Genomic context

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See HCAG_05000 in Genome Data Viewer
Location:
chromosome: Unknown
Exon count:
6

NW_001813978.1Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene spermidine synthase Neighboring gene hypothetical protein Neighboring gene hypothetical protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_001813978.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables transketolase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in pentose-phosphate shunt IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
transketolase 1

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NW_001813978.1 Reference assembly

    Range
    474090..477079 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_001539483.1 → XP_001539533.1  transketolase 1 [Histoplasma mississippiense (nom. inval.)]

    See identical proteins and their annotated locations for XP_001539533.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A6R5U2
    Conserved Domains (4) summary
    COG0021
    Location:3 → 631
    TktA; Transketolase [Carbohydrate transport and metabolism]
    pfam02779
    Location:320 → 498
    Transket_pyr; Transketolase, pyrimidine binding domain
    pfam02780
    Location:511 → 622
    Transketolase_C; Transketolase, C-terminal domain
    cl01629
    Location:7 → 304
    TPP_enzymes; Thiamine pyrophosphate (TPP) enzyme family, TPP-binding module; found in many key metabolic enzymes which use TPP (also known as thiamine diphosphate) as a cofactor. These enzymes include, among others, the E1 components of the pyruvate, the acetoin and ...
Protein Accession Links
GenPept Link UniProtKB Link
EDN08501.1

Gene LinkOut

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Molecular Biology Databases
Research Materials