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Bcpex13 Bcpex13 [ Botrytis cinerea B05.10 ]

Gene ID: 5440351, updated on 21-Dec-2023

Summary

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Gene symbol
Bcpex13
Gene description
Bcpex13
Locus tag
BCIN_05g05280
Gene type
protein coding
RNA name
Bcpex13
RefSeq status
PROVISIONAL
Organism
Botrytis cinerea B05.10 (strain: B05.10)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Leotiomycetes; Helotiales; Sclerotiniaceae; Botrytis
Old locus tag
BC1G_01877
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Genomic context

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See Bcpex13 in Genome Data Viewer
Location:
chromosome: 5
Exon count:
3
Sequence:
Chromosome: 5; NC_037314.1 (1870763..1873101, complement)

Chromosome 5 - NC_037314.1Genomic Context describing neighboring genes Neighboring gene Bchis4 Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_037314.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. A gapless genome sequence of the fungus Botrytis cinerea. Van Kan JA, et al. Mol Plant Pathol, 2017 Jan. PMID 26913498, Free PMC Article
  2. Genome update of Botrytis cinerea strains B05.10 and T4. Staats M, et al. Eukaryot Cell, 2012 Nov. PMID 23104368, Free PMC Article
  3. Genomic analysis of the necrotrophic fungal pathogens Sclerotinia sclerotiorum and Botrytis cinerea. Amselem J, et al. PLoS Genet, 2011 Aug. PMID 21876677, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein import into peroxisome matrix, docking IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of peroxisomal importomer complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in peroxisomal membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in peroxisome IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
Bcpex13

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_037314.1 Reference assembly

    Range
    1870763..1873101 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_001559671.2 → XP_001559721.1  Bcpex13 [Botrytis cinerea B05.10]

    See identical proteins and their annotated locations for XP_001559721.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A384JHV4, G2YPN5, M7UGL8
    Conserved Domains (2) summary
    cd11771
    Location:323 → 386
    SH3_Pex13p_fungal; Src Homology 3 domain of fungal peroxisomal membrane protein Pex13p
    pfam04088
    Location:151 → 284
    Peroxin-13_N; Peroxin 13, N-terminal region
Nucleotide Protein
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