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BCIN_03g06810 hypothetical protein [ Botrytis cinerea B05.10 ]

Gene ID: 5436057, updated on 21-Dec-2023

Summary

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Gene symbol
BCIN_03g06810
Gene description
hypothetical protein
Locus tag
BCIN_03g06810
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Botrytis cinerea B05.10 (strain: B05.10)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Leotiomycetes; Helotiales; Sclerotiniaceae; Botrytis
Old locus tag
BC1G_06195
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Genomic context

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See BCIN_03g06810 in Genome Data Viewer
Location:
chromosome: 3
Exon count:
5
Sequence:
Chromosome: 3; NC_037312.1 (2296281..2302671)

Chromosome 3 - NC_037312.1Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene Bctsc11 Neighboring gene hypothetical protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_037312.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. A gapless genome sequence of the fungus Botrytis cinerea. Van Kan JA, et al. Mol Plant Pathol, 2017 Jan. PMID 26913498, Free PMC Article
  2. Genome update of Botrytis cinerea strains B05.10 and T4. Staats M, et al. Eukaryot Cell, 2012 Nov. PMID 23104368, Free PMC Article
  3. Genomic analysis of the necrotrophic fungal pathogens Sclerotinia sclerotiorum and Botrytis cinerea. Amselem J, et al. PLoS Genet, 2011 Aug. PMID 21876677, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables mRNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables translation initiation factor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of eukaryotic translation initiation factor 4F complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
hypothetical protein

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_037312.1 Reference assembly

    Range
    2296281..2302671
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_024692098.1 → XP_024547873.1  hypothetical protein BCIN_03g06810 [Botrytis cinerea B05.10]

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A384JD39, G2YI14, M7UNR3
    Conserved Domains (6) summary
    pfam02854
    Location:1019 → 1261
    MIF4G; MIF4G domain
    pfam07271
    Location:273 → 388
    Cytadhesin_P30; Cytadhesin P30/P32
    pfam08432
    Location:655 → 732
    Vfa1; AAA-ATPase Vps4-associated protein 1
    pfam12152
    Location:760 → 822
    eIF_4G1; Eukaryotic translation initiation factor 4G1
    cl25764
    Location:292 → 543
    PAT1; Topoisomerase II-associated protein PAT1
    cl26464
    Location:28 → 323
    Atrophin-1; Atrophin-1 family

  2. XM_024692099.1 → XP_024547872.1  hypothetical protein BCIN_03g06810 [Botrytis cinerea B05.10]

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A384JDA3, G2YI14
    Conserved Domains (6) summary
    pfam02854
    Location:996 → 1238
    MIF4G; MIF4G domain
    pfam07271
    Location:273 → 388
    Cytadhesin_P30; Cytadhesin P30/P32
    pfam08432
    Location:632 → 709
    Vfa1; AAA-ATPase Vps4-associated protein 1
    pfam12152
    Location:737 → 799
    eIF_4G1; Eukaryotic translation initiation factor 4G1
    cl25764
    Location:292 → 520
    PAT1; Topoisomerase II-associated protein PAT1
    cl26464
    Location:28 → 323
    Atrophin-1; Atrophin-1 family
Nucleotide Protein
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