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LBRM_12_0230 putative proteasome regulatory ATPase subunittcc1l8.3 [ Leishmania braziliensis MHOM/BR/75/M2904 ]

Gene ID: 5413564, updated on 28-Dec-2023

Summary

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Gene symbol
LBRM_12_0230
Gene description
putative proteasome regulatory ATPase subunittcc1l8.3
Locus tag
LBRM_12_0230
Gene type
protein coding
RNA name
putative proteasome regulatory ATPase subunittcc1l8.3
RefSeq status
PROVISIONAL
Organism
Leishmania braziliensis MHOM/BR/75/M2904 (strain: MHOM/BR/75/M2904)
Lineage
Eukaryota; Euglenozoa; Kinetoplastida; Trypanosomatidae; Leishmaniinae; Leishmania; Leishmania braziliensis species complex
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Genomic context

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Location:
chromosome: 12
Exon count:
1
Sequence:
Chromosome: 12; NC_009304.2 (72603..73688)

Chromosome 12 - NC_009304.2Genomic Context describing neighboring genes Neighboring gene putative ubiquitin hydrolase Neighboring gene hypothetical protein, unknown function Neighboring gene putative hydroxyacylglutathione hydrolase Neighboring gene conserved hypothetical protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_009304.2

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Comparative genomic analysis of three Leishmania species that cause diverse human disease. Peacock CS, et al. Nat Genet, 2007 Jul. PMID 17572675, Free PMC Article
  2. Chromosome and gene copy number variation allow major structural change between species and strains of Leishmania. Rogers MB, et al. Genome Res, 2011 Dec. PMID 22038252, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ATP hydrolysis activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables proteasome-activating activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in proteasome-mediated ubiquitin-dependent protein catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of proteasome regulatory particle, base subcomplex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Names
putative proteasome regulatory ATPase subunittcc1l8.3

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_009304.2 Reference assembly

    Range
    72603..73688
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_001563023.1 → XP_001563073.1  putative proteasome regulatory ATPase subunittcc1l8.3 [Leishmania braziliensis MHOM/BR/75/M2904]

    See identical proteins and their annotated locations for XP_001563073.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A3P3Z0J4, A4H6T6
    Conserved Domains (2) summary
    PTZ00454
    Location:1 → 361
    PTZ00454; 26S protease regulatory subunit 6B-like protein; Provisional
    pfam00004
    Location:144 → 277
    AAA; ATPase family associated with various cellular activities (AAA)
Nucleotide Protein
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