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LASP1 LIM and SH3 protein 1 [ Bos taurus (cattle) ]

Gene ID: 532851, updated on 4-Apr-2024

Summary

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Official Symbol
LASP1provided by VGNC
Official Full Name
LIM and SH3 protein 1provided by VGNC
Primary source
VGNC:VGNC:30798
See related
BGD:BT13202; Ensembl:ENSBTAG00000030587
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Bos taurus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 19
Exon count:
7
Annotation release Status Assembly Chr Location
RS_2023_09 current ARS-UCD2.0 (GCF_002263795.3) 19 NC_037346.1 (39454627..39495002)

Chromosome 19 - NC_037346.1Genomic Context describing neighboring genes Neighboring gene transfer RNA cysteine (anticodon GCA) Neighboring gene microRNA mir-2341 Neighboring gene F-box protein 47 Neighboring gene plexin domain containing 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_037346.1 Chromosome 19 Reference ARS-UCD2.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. A whole-genome assembly of the domestic cow, Bos taurus. Zimin AV, et al. Genome Biol, 2009. PMID 19393038, Free PMC Article
  2. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, et al. Proc Natl Acad Sci U S A, 2002 Dec 24. PMID 12477932, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Clone Names

  • MGC128762

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables actin filament binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in focal adhesion IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
LIM and SH3 domain protein 1
Names
LASP-1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001035394.1 → NP_001030471.1  LIM and SH3 domain protein 1

    See identical proteins and their annotated locations for NP_001030471.1

    Status: PROVISIONAL

    Source sequence(s)
    BC107542
    UniProtKB/Swiss-Prot
    Q3B7M5
    Related
    ENSBTAP00000040793.2, ENSBTAT00000043205.3
    Conserved Domains (3) summary
    smart00227
    Location:98 → 128
    NEBU; The Nebulin repeat is present also in Las1
    cd09447
    Location:5 → 57
    LIM_LASP; The LIM domain of LIM and SH3 Protein (LASP)
    cd11934
    Location:202 → 260
    SH3_Lasp1_C; C-terminal Src Homology 3 domain of LIM and SH3 domain protein 1

RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2023_09

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ARS-UCD2.0 Primary Assembly

Genomic

  1. NC_037346.1 Reference ARS-UCD2.0 Primary Assembly

    Range
    39454627..39495002
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_010816146.3 → XP_010814448.1  LIM and SH3 domain protein 1 isoform X1

    See identical proteins and their annotated locations for XP_010814448.1

    Related
    ENSBTAP00000082358.1, ENSBTAT00000088217.1
    Conserved Domains (2) summary
    smart00227
    Location:42 → 72
    NEBU; The Nebulin repeat is present also in Las1
    cd11934
    Location:146 → 204
    SH3_Lasp1_C; C-terminal Src Homology 3 domain of LIM and SH3 domain protein 1
Nucleotide Protein Strain
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q3B7M5.1 GenPept UniProtKB/Swiss-Prot:Q3B7M5

Gene LinkOut

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