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VPS36 Vacuolar protein-sorting-associated protein 36 [ Lodderomyces elongisporus ]

Gene ID: 5235413, updated on 6-Jun-2024

Summary

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Gene symbol
VPS36
Gene description
Vacuolar protein-sorting-associated protein 36
Locus tag
PVL30_001000
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Lodderomyces elongisporus (strain: NRRL YB-4239, culture-collection: ATCC:11503, culture-collection: NRRL:YB-4239, type-material: culture from holotype of Saccharomyces elongisporus)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Debaryomycetaceae; Candida/Lodderomyces clade; Lodderomyces
Old locus tag
LELG_01033
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Genomic context

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See VPS36 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
1
Sequence:
Chromosome: 1; NC_083673.1 (2782379..2784427)

Chromosome 1 - NC_083673.1Genomic Context describing neighboring genes Neighboring gene branched-chain-amino-acid transaminase bat2 Neighboring gene Hym1p Neighboring gene cyclin-dependent protein kinase Neighboring gene mitogen-activated protein kinase

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_083673.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables phosphatidylinositol-3-phosphate binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ubiquitin binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein transport to vacuole involved in ubiquitin-dependent protein catabolic process via the multivesicular body sorting pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of ESCRT II complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in late endosome membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
Vacuolar protein-sorting-associated protein 36
XP_001528513.2
  • BUSCO:EOG09262LQT

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_083673.1 Reference assembly

    Range
    2782379..2784427
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_001528463.1 → XP_001528513.2  Vacuolar protein-sorting-associated protein 36 [Lodderomyces elongisporus]

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A5DUJ7
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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