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SEC21 coatomer subunit gamma [ Lodderomyces elongisporus ]

Gene ID: 5233659, updated on 1-Feb-2024

Summary

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Gene symbol
SEC21
Gene description
coatomer subunit gamma
Locus tag
PVL30_001765
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Lodderomyces elongisporus (strain: NRRL YB-4239, culture-collection: ATCC:11503, culture-collection: NRRL:YB-4239, type-material: culture from holotype of Saccharomyces elongisporus)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Debaryomycetaceae; Candida/Lodderomyces clade; Lodderomyces
Old locus tag
LELG_01790
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Genomic context

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See SEC21 in Genome Data Viewer
Location:
chromosome: 2
Exon count:
1
Sequence:
Chromosome: 2; NC_083674.1 (1213590..1216493, complement)

Chromosome 2 - NC_083674.1Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene Cation-independent mannose-6-phosphate receptor CI-MPR Neighboring gene target of rapamycin complex 1 subunit tco89 Neighboring gene uncharacterized protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_083674.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables structural molecule activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in endoplasmic reticulum to Golgi vesicle-mediated transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in intra-Golgi vesicle-mediated transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in intracellular protein transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein secretion IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of COPI vesicle coat IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in Golgi membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in endoplasmic reticulum-Golgi intermediate compartment IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
coatomer subunit gamma
XP_001526961.2
  • BUSCO:EOG09260JTZ

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_083674.1 Reference assembly

    Range
    1213590..1216493 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_001526911.1 → XP_001526961.2  coatomer subunit gamma [Lodderomyces elongisporus]

    Status: PROVISIONAL

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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Molecular Biology Databases