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TUB1 alpha-tubulin [ Lodderomyces elongisporus ]

Gene ID: 5230519, updated on 1-Feb-2024

Summary

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Gene symbol
TUB1
Gene description
alpha-tubulin
Locus tag
PVL30_002471
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Lodderomyces elongisporus (strain: NRRL YB-4239, culture-collection: ATCC:11503, culture-collection: NRRL:YB-4239, type-material: culture from holotype of Saccharomyces elongisporus)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Debaryomycetaceae; Candida/Lodderomyces clade; Lodderomyces
Old locus tag
LELG_05377
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Genomic context

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See TUB1 in Genome Data Viewer
Location:
chromosome: 3
Exon count:
2
Sequence:
Chromosome: 3; NC_083675.1 (347398..349245)

Chromosome 3 - NC_083675.1Genomic Context describing neighboring genes Neighboring gene 3-hydroxy-3-methylglutaryl coenzyme A synthase Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene pyridoxal reductase Plr1

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_083675.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables GTP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables structural constituent of cytoskeleton IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in microtubule cytoskeleton organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in mitotic cell cycle IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in nuclear division IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in nuclear migration by microtubule mediated pushing forces IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in microtubule IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in spindle IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
alpha-tubulin

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_083675.1 Reference assembly

    Range
    347398..349245
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_001523481.1 → XP_001523531.1  alpha-tubulin [Lodderomyces elongisporus]

    See identical proteins and their annotated locations for XP_001523531.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A5E6Y8
    Conserved Domains (2) summary
    PTZ00335
    Location:1 → 447
    PTZ00335; tubulin alpha chain; Provisional
    cd02186
    Location:2 → 436
    alpha_tubulin; The alpha-tubulin family
Nucleotide Protein
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Gene LinkOut

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Molecular Biology Databases