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IHH Indian hedgehog signaling molecule [ Bos taurus (cattle) ]

Gene ID: 522714, updated on 5-Mar-2024

Summary

Official Symbol
IHHprovided by VGNC
Official Full Name
Indian hedgehog signaling moleculeprovided by VGNC
Primary source
VGNC:VGNC:30099
See related
BGD:BT10251
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Bos taurus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
Orthologs
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Genomic context

See IHH in Genome Data Viewer
Location:
chromosome: 2
Exon count:
3
Annotation release Status Assembly Chr Location
RS_2023_09 current ARS-UCD2.0 (GCF_002263795.3) 2 NC_037329.1 (107001062..107006924, complement)

Chromosome 2 - NC_037329.1Genomic Context describing neighboring genes Neighboring gene microRNA mir-375 Neighboring gene cilia and flagella associated protein 65 Neighboring gene non-homologous end joining factor 1 Neighboring gene solute carrier family 23 member 3

Genomic regions, transcripts, and products

Genomic Sequence:
NC_037329.1 Chromosome 2 Reference ARS-UCD2.0 Primary Assembly

General gene information

Clone Names

  • MGC151515

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables calcium ion binding IEA
Inferred from Electronic Annotation
more info
PubMed 
enables patched binding IEA
Inferred from Electronic Annotation
more info
PubMed 
Process Evidence Code Pubs
involved_in cell fate specification IEA
Inferred from Electronic Annotation
more info
PubMed 
involved_in cell-cell signaling IEA
Inferred from Electronic Annotation
more info
PubMed 
involved_in intein-mediated protein splicing IEA
Inferred from Electronic Annotation
more info
PubMed 
involved_in multicellular organism development IEA
Inferred from Electronic Annotation
more info
PubMed 
involved_in protein autoprocessing IEA
Inferred from Electronic Annotation
more info
PubMed 
involved_in regulation of gene expression IEA
Inferred from Electronic Annotation
more info
PubMed 
involved_in smoothened signaling pathway IEA
Inferred from Electronic Annotation
more info
PubMed 
Component Evidence Code Pubs
located_in extracellular space IEA
Inferred from Electronic Annotation
more info
PubMed 

General protein information

Preferred Names
indian hedgehog protein
Names
Indian hedgehog homolog

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001076870.2NP_001070338.2  indian hedgehog protein

    See identical proteins and their annotated locations for NP_001070338.2

    Status: VALIDATED

    Source sequence(s)
    BC123901, CK967443, CK967652, CN794024
    UniProtKB/TrEMBL
    F6QA78, Q08D77
    Conserved Domains (3) summary
    cd00081
    Location:101245
    Hint; Hedgehog/Intein domain, found in Hedgehog proteins as well as proteins which contain inteins and undergo protein splicing (e.g. DnaB, RIR1-2, GyrA and Pol). In protein splicing an intervening polypeptide sequence - the intein - is excised from a protein, ...
    pfam01079
    Location:90284
    Hint; Hint module
    pfam01085
    Location:187
    HH_signal; Hedgehog amino-terminal signalling domain

RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2023_09

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ARS-UCD2.0 Primary Assembly

Genomic

  1. NC_037329.1 Reference ARS-UCD2.0 Primary Assembly

    Range
    107001062..107006924 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)