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LOC517884 PRAME family member 12 [ Bos taurus (cattle) ]

Gene ID: 517884, updated on 6-Jun-2024

Summary

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Gene symbol
LOC517884
Gene description
PRAME family member 12
See related
BGD:BT27933; Ensembl:ENSBTAG00000052938
Gene type
protein coding
RefSeq status
MODEL
Organism
Bos taurus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
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Genomic context

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See LOC517884 in Genome Data Viewer
Location:
chromosome: 16
Exon count:
8
Annotation release Status Assembly Chr Location
RS_2023_09 current ARS-UCD2.0 (GCF_002263795.3) 16 NC_037343.1 (54501997..54536279, complement)

Chromosome 16 - NC_037343.1Genomic Context describing neighboring genes Neighboring gene PRAME family member 12-like Neighboring gene melanoma antigen preferentially expressed in tumors-like Neighboring gene preferentially expressed antigen in melanoma-like Neighboring gene PRAME family member 8

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_037343.1 Chromosome 16 Reference ARS-UCD2.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. A whole-genome assembly of the domestic cow, Bos taurus. Zimin AV, et al. Genome Biol, 2009. PMID 19393038, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in negative regulation of DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in negative regulation of apoptotic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in negative regulation of cell differentiation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of cell population proliferation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
PRAME family member 12

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2023_09

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ARS-UCD2.0 Primary Assembly

Genomic

  1. NC_037343.1 Reference ARS-UCD2.0 Primary Assembly

    Range
    54501997..54536279 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_024976852.2 → XP_024832620.2  PRAME family member 12 isoform X1

    UniProtKB/TrEMBL
    A0A3Q1LFW5, A0A3Q1MKG7
    Related
    ENSBTAP00000057161.2, ENSBTAT00000071176.2

  2. XM_005217221.5 → XP_005217278.1  PRAME family member 12 isoform X2

    See identical proteins and their annotated locations for XP_005217278.1

    UniProtKB/TrEMBL
    A0A3Q1MKG7
    Conserved Domains (1) summary
    cl26161
    Location:254 → 407
    LRR_RI; Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond ...

  3. XM_059875787.1 → XP_059731770.1  PRAME family member 12 isoform X2

    UniProtKB/TrEMBL
    A0A3Q1MKG7
Nucleotide Protein Strain
Heading Accession and Version

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