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GTF2H2 general transcription factor IIH, polypeptide 2, 44kDa [ Bos taurus (domestic cattle) ]

Gene ID: 511829, updated on 24-Aug-2024

Summary

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Gene symbol
GTF2H2
Gene description
general transcription factor IIH, polypeptide 2, 44kDa
See related
BGD:BT30114; Ensembl:ENSBTAG00000027983
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Bos taurus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
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Genomic context

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Location:
chromosome: 20
Exon count:
18
Annotation release Status Assembly Chr Location
RS_2023_09 current ARS-UCD2.0 (GCF_002263795.3) 20 NC_037347.1 (10193021..10223924, complement)

Chromosome 20 - NC_037347.1Genomic Context describing neighboring genes Neighboring gene survival of motor neuron 2, centromeric Neighboring gene NLR family apoptosis inhibitory protein Neighboring gene transfer RNA lysine (anticodon UUU) Neighboring gene occludin Neighboring gene microRNA mir-7858

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_037347.1 Chromosome 20 Reference ARS-UCD2.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. A whole-genome assembly of the domestic cow, Bos taurus. Zimin AV, et al. Genome Biol, 2009. PMID 19393038, Free PMC Article

GeneRIFs: Gene References Into Functions

Pathways from PubChem

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General gene information

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Homology

Clone Names

  • MGC133741

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables zinc ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in nucleotide-excision repair IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of transcription factor TFIIH core complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of transcription factor TFIIH holo complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
general transcription factor IIH subunit 2
Names
general transcription factor IIH polypeptide 2

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001038530.1 → NP_001033619.1  general transcription factor IIH subunit 2

    See identical proteins and their annotated locations for NP_001033619.1

    Status: PROVISIONAL

    Source sequence(s)
    BC109593
    UniProtKB/Swiss-Prot
    Q2TBV5
    UniProtKB/TrEMBL
    A0A3Q1MNT2
    Related
    ENSBTAP00000072953.1, ENSBTAT00000083800.2
    Conserved Domains (1) summary
    cl06838
    Location:11 → 385
    C1_4; TFIIH C1-like domain

RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2023_09

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ARS-UCD2.0 Primary Assembly

Genomic

  1. NC_037347.1 Reference ARS-UCD2.0 Primary Assembly

    Range
    10193021..10223924 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_024981256.2 → XP_024837024.1  general transcription factor IIH subunit 2 isoform X3

    UniProtKB/TrEMBL
    A0A3Q1MNT2, A0A3Q1MPP0
    Related
    ENSBTAP00000071624.2, ENSBTAT00000073943.2
    Conserved Domains (1) summary
    cl06838
    Location:21 → 395
    C1_4; TFIIH C1-like domain

  2. XM_059878699.1 → XP_059734682.1  general transcription factor IIH subunit 2 isoform X2

    UniProtKB/TrEMBL
    A0A3Q1MYC5
    Related
    ENSBTAP00000061028.2, ENSBTAT00000073301.2

  3. XM_059878698.1 → XP_059734681.1  general transcription factor IIH subunit 2 isoform X1

    UniProtKB/TrEMBL
    A0AAF6ZE96

  4. XM_059878700.1 → XP_059734683.1  general transcription factor IIH subunit 2 isoform X2

    UniProtKB/TrEMBL
    A0A3Q1MYC5
Nucleotide Protein Strain
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q2TBV5.1 GenPept UniProtKB/Swiss-Prot:Q2TBV5

Gene LinkOut

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