RPAP3 RNA polymerase II associated protein 3 [Bos taurus (cattle)] - Gene

Summary

Official Symbol: RPAP3provided by VGNC
Official Full Name: RNA polymerase II associated protein 3provided by VGNC
Primary source: VGNC:VGNC:34100
See related: BGD:BT30452; Ensembl:ENSBTAG00000018690
Gene type: protein coding
RefSeq status: VALIDATED
Organism: Bos taurus
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
Orthologs: human mouse all
NEW: Try the new Gene table
Try the new Transcript table

Genomic context

Location:: chromosome: 5

Exon count:: 17

Annotation release	Status	Assembly	Chr	Location
RS_2023_09	current	ARS-UCD2.0 (GCF_002263795.3)	5	NC_037332.1 (32589613..32627746)

Chromosome 5 - NC_037332.1 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to reference sequence details

Genomic Sequence:: NC_037332.1 Chromosome 5 Reference ARS-UCD2.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the page Help

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Submit: New GeneRIF Correction

General gene information

Go to the top of the page Help

Gene Ontology Provided by RefSeq

Function	Evidence Code	Pubs
enables protein binding	IEA Inferred from Electronic Annotation more info	PubMed

General protein information

Go to the top of the page Help

Preferred Names: RNA polymerase II-associated protein 3

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

NM_001101930.2 → NP_001095400.2 RNA polymerase II-associated protein 3

See identical proteins and their annotated locations for NP_001095400.2

Status: VALIDATED

Source sequence(s)

BC149285, EE240567, EE241753, EH202928

UniProtKB/TrEMBL

F1MFU5, F1N0V7

Related

ENSBTAP00000024878.5, ENSBTAT00000024878.7

Conserved Domains (6) summary

smart00028
Location:133 → 166

TPR; Tetratricopeptide repeats

sd00006
Location:133 → 161

TPR; TPR repeat [structural motif]

pfam00515
Location:202 → 234

TPR_1; Tetratricopeptide repeat

pfam13414
Location:132 → 197

TPR_11; TPR repeat

pfam13432
Location:173 → 234

TPR_16; Tetratricopeptide repeat

pfam13877
Location:545 → 636

RPAP3_C; Potential Monad-binding region of RPAP3