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GNPTG N-acetylglucosamine-1-phosphate transferase subunit gamma [ Bos taurus (cattle) ]

Gene ID: 508713, updated on 6-Jun-2024

Summary

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Official Symbol
GNPTGprovided by VGNC
Official Full Name
N-acetylglucosamine-1-phosphate transferase subunit gammaprovided by VGNC
Primary source
VGNC:VGNC:29480
See related
Ensembl:ENSBTAG00000014118
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Bos taurus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
Orthologs
human mouse all
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Genomic context

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See GNPTG in Genome Data Viewer
Location:
chromosome: 25
Exon count:
11
Annotation release Status Assembly Chr Location
RS_2023_09 current ARS-UCD2.0 (GCF_002263795.3) 25 NC_037352.1 (1072853..1083887)

Chromosome 25 - NC_037352.1Genomic Context describing neighboring genes Neighboring gene ubiquitin conjugating enzyme E2 I Neighboring gene BAI1 associated protein 3 Neighboring gene TSR3 ribosome maturation factor Neighboring gene unk like zinc finger Neighboring gene ubiquinol-cytochrome c reductase complex assembly factor 4 Neighboring gene proline and glutamate rich with coiled coil 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_037352.1 Chromosome 25 Reference ARS-UCD2.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Bovine UDP-N-acetylglucosamine:lysosomal-enzyme N-acetylglucosamine-1-phosphotransferase. I. Purification and subunit structure. Bao M, et al. J Biol Chem, 1996 Dec 6. PMID 8940155
  2. Functions of the alpha, beta, and gamma subunits of UDP-GlcNAc:lysosomal enzyme N-acetylglucosamine-1-phosphotransferase. Qian Y, et al. J Biol Chem, 2010 Jan 29. PMID 19955174, Free PMC Article
  3. Characterization of 954 bovine full-CDS cDNA sequences. Harhay GP, et al. BMC Genomics, 2005 Nov 23. PMID 16305752, Free PMC Article
  4. A whole-genome assembly of the domestic cow, Bos taurus. Zimin AV, et al. Genome Biol, 2009. PMID 19393038, Free PMC Article

GeneRIFs: Gene References Into Functions

What's a GeneRIF?
  1. analysis of functional differences in alpha, beta, and gamma subunits of UDP-GlcNAc:lysosomal enzyme N-acetylglucosamine-1-phosphotransferase
    Title: Functions of the alpha, beta, and gamma subunits of UDP-GlcNAc:lysosomal enzyme N-acetylglucosamine-1-phosphotransferase.
Submit: New GeneRIF Correction

General gene information

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Homology

Gene Ontology Provided by RefSeq

Component Evidence Code Pubs
located_in Golgi apparatus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
N-acetylglucosamine-1-phosphotransferase subunit gamma
Names
N-acetylglucosamine-1-phosphate transferase gamma subunit
N-acetylglucosamine-1-phosphotransferase, gamma subunit
UDP-N-acetylglucosamine-1-phosphotransferase subunit gamma
glcNAc-1-phosphotransferase subunit gamma

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001017428.1 → NP_001017428.1  N-acetylglucosamine-1-phosphotransferase subunit gamma

    See identical proteins and their annotated locations for NP_001017428.1

    Status: PROVISIONAL

    Source sequence(s)
    BT021869
    Conserved Domains (2) summary
    pfam06464
    Location:152 → 205
    DMAP_binding; DMAP1-binding Domain
    pfam07915
    Location:43 → 103
    PRKCSH; Glucosidase II beta subunit-like protein

RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2023_09

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ARS-UCD2.0 Primary Assembly

Genomic

  1. NC_037352.1 Reference ARS-UCD2.0 Primary Assembly

    Range
    1072853..1083887
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_005224411.5 → XP_005224468.1  N-acetylglucosamine-1-phosphotransferase subunit gamma isoform X1

    See identical proteins and their annotated locations for XP_005224468.1

    UniProtKB/Swiss-Prot
    A5PJW7, Q58CS8
    Conserved Domains (2) summary
    pfam06464
    Location:178 → 231
    DMAP_binding; DMAP1-binding Domain
    pfam07915
    Location:69 → 129
    PRKCSH; Glucosidase II beta subunit-like protein

  2. XM_010819076.4 → XP_010817378.1  N-acetylglucosamine-1-phosphotransferase subunit gamma isoform X2

    UniProtKB/TrEMBL
    A0AAA9TYR3
    Related
    ENSBTAP00000103486.1, ENSBTAT00000018766.6
    Conserved Domains (2) summary
    pfam06464
    Location:150 → 203
    DMAP_binding; DMAP1-binding Domain
    cl06793
    Location:106 → 146
    PRKCSH; Glucosidase II beta subunit-like protein
Nucleotide Protein Strain
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q58CS8.4 GenPept UniProtKB/Swiss-Prot:Q58CS8

Gene LinkOut

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Molecular Biology Databases
Research Materials