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SLC44A3 solute carrier family 44 member 3 [ Bos taurus (cattle) ]

Gene ID: 507455, updated on 5-Mar-2024

Summary

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Official Symbol
SLC44A3provided by VGNC
Official Full Name
solute carrier family 44 member 3provided by VGNC
Primary source
VGNC:VGNC:34877
See related
BGD:BT21487; Ensembl:ENSBTAG00000020344
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Bos taurus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
Also known as
CTL3
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 3
Exon count:
17
Annotation release Status Assembly Chr Location
RS_2023_09 current ARS-UCD2.0 (GCF_002263795.3) 3 NC_037330.1 (48598932..48687443, complement)

Chromosome 3 - NC_037330.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC112445985 Neighboring gene ALG14 UDP-N-acetylglucosaminyltransferase subunit Neighboring gene transfer RNA tyrosine (anticodon GUA) Neighboring gene calponin 3 Neighboring gene uncharacterized LOC112445986 Neighboring gene uncharacterized LOC132344873 Neighboring gene U6 spliceosomal RNA

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_037330.1 Chromosome 3 Reference ARS-UCD2.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. A whole-genome assembly of the domestic cow, Bos taurus. Zimin AV, et al. Genome Biol, 2009. PMID 19393038, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Clone Names

  • MGC157328

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables transmembrane transporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in transmembrane transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
choline transporter-like protein 3

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001098900.2 → NP_001092370.1  choline transporter-like protein 3

    See identical proteins and their annotated locations for NP_001092370.1

    Status: PROVISIONAL

    Source sequence(s)
    BC142344
    UniProtKB/Swiss-Prot
    A5PK40
    UniProtKB/TrEMBL
    A0A452DK17
    Related
    ENSBTAP00000063549.2, ENSBTAT00000075458.2
    Conserved Domains (1) summary
    pfam04515
    Location:289 → 600
    Choline_transpo; Plasma-membrane choline transporter

RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2023_09

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ARS-UCD2.0 Primary Assembly

Genomic

  1. NC_037330.1 Reference ARS-UCD2.0 Primary Assembly

    Range
    48598932..48687443 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_005204273.5 → XP_005204330.1  choline transporter-like protein 3 isoform X1

    UniProtKB/TrEMBL
    A0A452DK17
    Related
    ENSBTAP00000033454.6, ENSBTAT00000033542.6
    Conserved Domains (1) summary
    pfam04515
    Location:289 → 601
    Choline_transpo; Plasma-membrane choline transporter

  2. XM_005204276.5 → XP_005204333.1  choline transporter-like protein 3 isoform X2

    See identical proteins and their annotated locations for XP_005204333.1

    UniProtKB/TrEMBL
    A0A452DK17
    Conserved Domains (1) summary
    pfam04515
    Location:241 → 553
    Choline_transpo; Plasma-membrane choline transporter

  3. XM_005204277.5 → XP_005204334.1  choline transporter-like protein 3 isoform X2

    See identical proteins and their annotated locations for XP_005204334.1

    UniProtKB/TrEMBL
    A0A452DK17
    Conserved Domains (1) summary
    pfam04515
    Location:241 → 553
    Choline_transpo; Plasma-membrane choline transporter
Nucleotide Protein Strain
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
A5PK40.1 GenPept UniProtKB/Swiss-Prot:A5PK40

Gene LinkOut

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