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ccne2.S cyclin E2 S homeolog [ Xenopus laevis (African clawed frog) ]

Gene ID: 495419, updated on 2-May-2024

Summary

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Official Symbol
ccne2.S
Official Full Name
cyclin E2 S homeolog
Primary source
Xenbase:XB-GENE-17335284
Locus tag
XELAEV_18033911mg
See related
EnsemblRapid:ENSXLAG00005005116
Gene type
protein coding
RefSeq status
PREDICTED
Organism
Xenopus laevis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus
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Genomic context

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See ccne2.S in Genome Data Viewer
Location:
chromosome: 6S
Exon count:
12
Annotation release Status Assembly Chr Location
101 current Xenopus_laevis_v10.1 (GCF_017654675.1) 6S NC_054382.1 (116965653..116977023, complement)
100 previous assembly Xenopus_laevis_v2 (GCF_001663975.1) 6S NC_030735.1 (108313845..108325308, complement)

Chromosome 6S - NC_054382.1Genomic Context describing neighboring genes Neighboring gene rhodopsin, GQ-coupled Neighboring gene NADH dehydrogenase (ubiquinone) complex I, assembly factor 6-like Neighboring gene integrator complex subunit 8 S homeolog Neighboring gene tumor protein p53 inducible nuclear protein 1 S homeolog Neighboring gene dpy-19-like 4 S homeolog

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genetic and genomic tools for Xenopus research: The NIH Xenopus initiative. Klein SL, et al. Dev Dyn, 2002 Dec. PMID 12454917
  2. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, et al. Proc Natl Acad Sci U S A, 2002 Dec 24. PMID 12477932, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by Xenbase

Function Evidence Code Pubs
enables cyclin-dependent protein serine/threonine kinase regulator activity IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
acts_upstream_of_or_within G1/S transition of mitotic cell cycle IEA
Inferred from Electronic Annotation
more info
  
acts_upstream_of_or_within cell division IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
part_of cyclin E1-CDK2 complex IEA
Inferred from Electronic Annotation
more info
  
part_of cyclin E2-CDK2 complex IEA
Inferred from Electronic Annotation
more info
  
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
  
located_in nucleus IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
uncharacterized protein LOC495419

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001095076.1 → NP_001088545.1  uncharacterized protein LOC495419

    See identical proteins and their annotated locations for NP_001088545.1

    Status: PREDICTED

    Source sequence(s)
    BC084929
    UniProtKB/TrEMBL
    A0A974CKV4, Q5U4W4
    Related
    ENSXLAP00005015157.1, ENSXLAT00005015417.1
    Conserved Domains (2) summary
    pfam00134
    Location:111 → 238
    Cyclin_N; Cyclin, N-terminal domain
    pfam02984
    Location:240 → 360
    Cyclin_C; Cyclin, C-terminal domain

RefSeqs of Annotated Genomes: Xenopus laevis Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Xenopus_laevis_v10.1 Primary Assembly

Genomic

  1. NC_054382.1 Reference Xenopus_laevis_v10.1 Primary Assembly

    Range
    116965653..116977023 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

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