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BAMBI BMP and activin membrane bound inhibitor [ Canis lupus familiaris (dog) ]

Gene ID: 487081, updated on 5-Mar-2024

Summary

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Official Symbol
BAMBIprovided by VGNC
Official Full Name
BMP and activin membrane bound inhibitorprovided by VGNC
Primary source
VGNC:VGNC:38376
See related
Ensembl:ENSCAFG00845011687
Gene type
protein coding
RefSeq status
MODEL
Organism
Canis lupus familiaris (sub-species: familiaris)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
Orthologs
human mouse all
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Genomic context

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See BAMBI in Genome Data Viewer
Location:
chromosome: 2
Exon count:
3
Annotation release Status Assembly Chr Location
106 current ROS_Cfam_1.0 (GCF_014441545.1) 2 NC_051806.1 (15700785..15706918, complement)
106 current Dog10K_Boxer_Tasha (GCF_000002285.5) 2 NC_006584.4 (14952595..14958681, complement)
106 current UU_Cfam_GSD_1.0 (GCF_011100685.1) 2 NC_049223.1 (15300265..15306392, complement)
106 current UMICH_Zoey_3.1 (GCF_005444595.1) 2 NC_049262.1 (15139651..15145733, complement)
106 current UNSW_CanFamBas_1.0 (GCF_013276365.1) 2 NC_049743.1 (15026954..15033049, complement)

Chromosome 2 - NC_051806.1Genomic Context describing neighboring genes Neighboring gene transfer RNA lysine (anticodon CUU) Neighboring gene 40S ribosomal protein S15a-like Neighboring gene WW domain containing adaptor with coiled-coil Neighboring gene 40S ribosomal protein S3a-like Neighboring gene uncharacterized LOC111091394

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. BAMBI is a novel HIF1-dependent modulator of TGFβ-mediated disruption of cell polarity during hypoxia. Raykhel I, et al. J Cell Sci, 2018 May 23. PMID 29685894

GeneRIFs: Gene References Into Functions

What's a GeneRIF?
  1. BAMBI is identified in this pathway as a novel HIF1A-regulated gene that contributes to hypoxia-induced loss of epithelial polarity.
    Title: BAMBI is a novel HIF1-dependent modulator of TGFβ-mediated disruption of cell polarity during hypoxia.
Submit: New GeneRIF Correction

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables frizzled binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in negative regulation of transforming growth factor beta receptor signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of canonical Wnt signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in transforming growth factor beta receptor signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
BMP and activin membrane-bound inhibitor homolog

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ROS_Cfam_1.0

Genomic

  1. NC_051806.1 Reference ROS_Cfam_1.0

    Range
    15700785..15706918 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038658250.1 → XP_038514178.1  BMP and activin membrane-bound inhibitor homolog

    UniProtKB/TrEMBL
    A0A8C0LTQ4, A0A8C0MX50, A0A8C0PSW4, A0A8I3NIP6, A0A8I3NJD4
    Related
    ENSCAFP00845016268.1, ENSCAFT00845020740.1
    Conserved Domains (1) summary
    pfam06211
    Location:4 → 111
    BAMBI; BMP and activin membrane-bound inhibitor (BAMBI) N-terminal domain

Alternate UMICH_Zoey_3.1

Genomic

  1. NC_049262.1 Alternate UMICH_Zoey_3.1

    Range
    15139651..15145733 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038469212.1 → XP_038325140.1  BMP and activin membrane-bound inhibitor homolog

    Conserved Domains (1) summary
    pfam06211
    Location:4 → 111
    BAMBI; BMP and activin membrane-bound inhibitor (BAMBI) N-terminal domain

Alternate UNSW_CanFamBas_1.0

Genomic

  1. NC_049743.1 Alternate UNSW_CanFamBas_1.0

    Range
    15026954..15033049 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038594193.1 → XP_038450121.1  BMP and activin membrane-bound inhibitor homolog

    Conserved Domains (1) summary
    pfam06211
    Location:4 → 111
    BAMBI; BMP and activin membrane-bound inhibitor (BAMBI) N-terminal domain

Alternate UU_Cfam_GSD_1.0

Genomic

  1. NC_049223.1 Alternate UU_Cfam_GSD_1.0

    Range
    15300265..15306392 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038529924.1 → XP_038385852.1  BMP and activin membrane-bound inhibitor homolog

    UniProtKB/TrEMBL
    A0A8C0LTQ4, A0A8C0MX50, A0A8C0PSW4, A0A8I3NIP6, A0A8I3NJD4
    Conserved Domains (1) summary
    pfam06211
    Location:4 → 111
    BAMBI; BMP and activin membrane-bound inhibitor (BAMBI) N-terminal domain

Alternate Dog10K_Boxer_Tasha Primary Assembly

Genomic

  1. NC_006584.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

    Range
    14952595..14958681 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_544209.6 → XP_544209.2  BMP and activin membrane-bound inhibitor homolog

    UniProtKB/TrEMBL
    A0A8C0LTQ4, A0A8C0MX50, A0A8C0PSW4, A0A8I3NIP6, A0A8I3NJD4
    Conserved Domains (1) summary
    pfam06211
    Location:4 → 111
    BAMBI; BMP and activin membrane-bound inhibitor (BAMBI) N-terminal domain
Nucleotide Protein
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