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MEC1 cell cycle checkpoint protein [ Scheffersomyces stipitis CBS 6054 ]

Gene ID: 4839417, updated on 21-Dec-2023

Summary

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Gene symbol
MEC1
Gene description
cell cycle checkpoint protein
Locus tag
PICST_32127
Gene type
protein coding
RNA name
cell cycle checkpoint protein
RefSeq status
PROVISIONAL
Organism
Scheffersomyces stipitis CBS 6054 (strain: CBS 6054)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Debaryomycetaceae; Scheffersomyces
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Genomic context

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Location:
chromosome: 5
Exon count:
2
Sequence:
Chromosome: 5; NC_009045.1 (739442..746536)

Chromosome 5 - NC_009045.1Genomic Context describing neighboring genes Neighboring gene methyltransferase family protein Neighboring gene Cyclin-dependent kinases regulatory subunit (Cell division control protein CKS1) Neighboring gene hypothetical protein Neighboring gene hypothetical protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_009045.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genome sequence of the lignocellulose-bioconverting and xylose-fermenting yeast Pichia stipitis. Jeffries TW, et al. Nat Biotechnol, 2007 Mar. PMID 17334359

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein serine/threonine kinase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in DNA damage checkpoint signaling IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein phosphorylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in telomere maintenance IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Names
cell cycle checkpoint protein
XP_001384809.2
  • 1-phosphatidylinositol 3-kinase.
    go_function phosphotransferase activity, alcohol group as acceptor

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_009045.1 Reference assembly

    Range
    739442..746536
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_001384772.1 → XP_001384809.2  cell cycle checkpoint protein [Scheffersomyces stipitis CBS 6054]

    See identical proteins and their annotated locations for XP_001384809.2

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A3LVH6
    Conserved Domains (4) summary
    COG5032
    Location:648 → 2351
    TEL1; Phosphatidylinositol kinase or protein kinase, PI-3 family [Signal transduction mechanisms]
    cd00892
    Location:2011 → 2294
    PIKKc_ATR; Catalytic domain of Ataxia telangiectasia and Rad3-related proteins
    pfam02260
    Location:2320 → 2351
    FATC; FATC domain
    pfam08064
    Location:858 → 943
    UME; UME (NUC010) domain
Nucleotide Protein
Heading Accession and Version

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