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NDC1 nuclear envelope protein [ Scheffersomyces stipitis CBS 6054 ]

Gene ID: 4839369, updated on 21-Dec-2023

Summary

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Gene symbol
NDC1
Gene description
nuclear envelope protein
Locus tag
PICST_83864
Gene type
protein coding
RNA name
nuclear envelope protein
RefSeq status
PROVISIONAL
Organism
Scheffersomyces stipitis CBS 6054 (strain: CBS 6054)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Debaryomycetaceae; Scheffersomyces
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Genomic context

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See NDC1 in Genome Data Viewer
Location:
chromosome: 5
Exon count:
2
Sequence:
Chromosome: 5; NC_009045.1 (150634..152580)

Chromosome 5 - NC_009045.1Genomic Context describing neighboring genes Neighboring gene endonuclease Neighboring gene mitochondrial ribosomal protein of small subunit Neighboring gene monovalent cation:H+ antiporter, CPA1 family (NHX1) Neighboring gene member of triose phosphate translocator family

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_009045.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genome sequence of the lignocellulose-bioconverting and xylose-fermenting yeast Pichia stipitis. Jeffries TW, et al. Nat Biotechnol, 2007 Mar. PMID 17334359

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables spindle pole body-nuclear membrane anchor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in nuclear pore organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in spindle pole body localization IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of nuclear pore transmembrane ring IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in spindle pole body IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Names
nuclear envelope protein
XP_001384682.2
  • nuclear envelope protein dispensable for mitotic spindle pole body duplication, but required for insertion of nascent spindle pole bodies into the nuclear envelope. ndc1 parental spindle pole bodies form monopolar spindles in mitosis. Required for meiosis II.

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_009045.1 Reference assembly

    Range
    150634..152580
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_001384645.1 → XP_001384682.2  nuclear envelope protein [Scheffersomyces stipitis CBS 6054]

    See identical proteins and their annotated locations for XP_001384682.2

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A3LUU5
    Conserved Domains (1) summary
    pfam09531
    Location:17 → 620
    Ndc1_Nup; Nucleoporin protein Ndc1-Nup
Nucleotide Protein
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