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PICST_82629 hypothetical protein [ Scheffersomyces stipitis CBS 6054 ]

Gene ID: 4838046, updated on 21-Dec-2023

Summary

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Gene symbol
PICST_82629
Gene description
hypothetical protein
Locus tag
PICST_82629
Gene type
protein coding
RNA name
predicted protein
RefSeq status
PROVISIONAL
Organism
Scheffersomyces stipitis CBS 6054 (strain: CBS 6054)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Debaryomycetaceae; Scheffersomyces
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Genomic context

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See PICST_82629 in Genome Data Viewer
Location:
chromosome: 3
Exon count:
2
Sequence:
Chromosome: 3; NC_009043.1 (501953..503809, complement)

Chromosome 3 - NC_009043.1Genomic Context describing neighboring genes Neighboring gene 60S ribosomal protein L10 Neighboring gene phosphomannomutase Neighboring gene hypothetical protein Neighboring gene hypothetical protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_009043.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genome sequence of the lignocellulose-bioconverting and xylose-fermenting yeast Pichia stipitis. Jeffries TW, et al. Nat Biotechnol, 2007 Mar. PMID 17334359

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ABC-type transporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ATP hydrolysis activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Names
hypothetical protein
XP_001383732.2
  • go_component membrane
    go_function ATP binding
    go_process transport

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_009043.1 Reference assembly

    Range
    501953..503809 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_001383695.1 → XP_001383732.2  predicted protein [Scheffersomyces stipitis CBS 6054]

    See identical proteins and their annotated locations for XP_001383732.2

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A3LR95
    Conserved Domains (3) summary
    TIGR00955
    Location:26 → 588
    3a01204; The Eye Pigment Precursor Transporter (EPP) Family protein
    pfam01061
    Location:316 → 520
    ABC2_membrane; ABC-2 type transporter
    cl21455
    Location:9 → 231
    P-loop_NTPase; P-loop containing Nucleoside Triphosphate Hydrolases
Nucleotide Protein
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