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PLB5 phospholipase B3 [ Scheffersomyces stipitis CBS 6054 ]

Gene ID: 4837317, updated on 21-Dec-2023

Summary

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Gene symbol
PLB5
Gene description
phospholipase B3
Locus tag
PICST_69971
Gene type
protein coding
RNA name
phospholipase B3
RefSeq status
PROVISIONAL
Organism
Scheffersomyces stipitis CBS 6054 (strain: CBS 6054)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Debaryomycetaceae; Scheffersomyces
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Genomic context

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See PLB5 in Genome Data Viewer
Location:
chromosome: 2
Exon count:
2
Sequence:
Chromosome: 2; NC_009042.1 (2368296..2374487)

Chromosome 2 - NC_009042.1Genomic Context describing neighboring genes Neighboring gene Multidrug resistance-associated protein/mitoxantrone resistance protein, ABC superfamily Neighboring gene Glucose-repressible alcohol dehydrogenase transcriptional effector (Cytoplasmic deadenylase) (Carbon catabolite repressor protein 4) Neighboring gene beta transducin Neighboring gene transcription regulatory protein GAL11

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_009042.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genome sequence of the lignocellulose-bioconverting and xylose-fermenting yeast Pichia stipitis. Jeffries TW, et al. Nat Biotechnol, 2007 Mar. PMID 17334359

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables phospholipase A2 activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in glycerophospholipid catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in extracellular region IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in intracellular membrane-bounded organelle IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Names
phospholipase B3
XP_001382679.2
  • Lysophospholipase 3 precursor (Phospholipase B 3)
    go_funtion phospholipase activity |4620
    go_process phospholipid catabolism |9395

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_009042.1 Reference assembly

    Range
    2368296..2374487
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_001382642.1 → XP_001382679.2  phospholipase B3 [Scheffersomyces stipitis CBS 6054]

    See identical proteins and their annotated locations for XP_001382679.2

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A3LQB5
    Conserved Domains (2) summary
    pfam01735
    Location:87 → 574
    PLA2_B; Lysophospholipase catalytic domain
    cl11396
    Location:21 → 575
    Patatin_and_cPLA2; Patatins and Phospholipases
Nucleotide Protein
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