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PICST_54531 ubiquitin-specific protease [ Scheffersomyces stipitis CBS 6054 ]

Gene ID: 4837003, updated on 21-Dec-2023

Summary

Gene symbol
PICST_54531
Gene description
ubiquitin-specific protease
Locus tag
PICST_54531
Gene type
protein coding
RNA name
predicted protein
RefSeq status
PROVISIONAL
Organism
Scheffersomyces stipitis CBS 6054 (strain: CBS 6054)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Debaryomycetaceae; Scheffersomyces
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Genomic context

See PICST_54531 in Genome Data Viewer
Location:
chromosome: 2
Exon count:
1
Sequence:
Chromosome: 2; NC_009042.1 (1923039..1924712, complement)

Chromosome 2 - NC_009042.1Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene polyadenylated RNA-binding protein Neighboring gene hypothetical protein

General gene information

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables cysteine-type deubiquitinase activity IEA
Inferred from Electronic Annotation
more info
PubMed 
enables cysteine-type endopeptidase activity IEA
Inferred from Electronic Annotation
more info
PubMed 
Process Evidence Code Pubs
involved_in protein deubiquitination IEA
Inferred from Electronic Annotation
more info
PubMed 
Component Evidence Code Pubs
located_in cytosol IEA
Inferred from Electronic Annotation
more info
PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
PubMed 

General protein information

Names
ubiquitin-specific protease
XP_001383141.2
  • go_funtion cysteine-type endopeptidase activity; ubiquitin thiolesterase activity
    go_process ubiquitin-dependent protein catabolism

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_009042.1 Reference assembly

    Range
    1923039..1924712 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_001383104.1XP_001383141.2  ubiquitin-specific protease, partial [Scheffersomyces stipitis CBS 6054]

    See identical proteins and their annotated locations for XP_001383141.2

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A3LPW4
    Conserved Domains (3) summary
    cd02662
    Location:33534
    Peptidase_C19F; A subfamily of Peptidase C19. Peptidase C19 contains ubiquitinyl hydrolases. They are intracellular peptidases that remove ubiquitin molecules from polyubiquinated peptides by cleavage of isopeptide bonds. They hydrolyze bonds involving the carboxyl ...
    cl02553
    Location:33161
    Peptidase_C19; Peptidase C19 contains ubiquitinyl hydrolases. They are intracellular peptidases that remove ubiquitin molecules from polyubiquinated peptides by cleavage of isopeptide bonds. They hydrolyse bonds involving the carboxyl group of the C-terminal Gly ...
    pfam00443
    Location:33533
    UCH; Ubiquitin carboxyl-terminal hydrolase