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ATG7 Autophagy-related protein 7 (Autophagy-related E1-like activating enzyme ATG7) [ Scheffersomyces stipitis CBS 6054 ]

Gene ID: 4836974, updated on 21-Dec-2023

Summary

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Gene symbol
ATG7
Gene description
Autophagy-related protein 7 (Autophagy-related E1-like activating enzyme ATG7)
Locus tag
PICST_42095
Gene type
protein coding
RNA name
Autophagy-related protein 7 (Autophagy-related E1-like activating enzyme ATG7)
RefSeq status
PROVISIONAL
Organism
Scheffersomyces stipitis CBS 6054 (strain: CBS 6054)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Debaryomycetaceae; Scheffersomyces
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Genomic context

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See ATG7 in Genome Data Viewer
Location:
chromosome: 2
Exon count:
1
Sequence:
Chromosome: 2; NC_009042.1 (1395895..1397853, complement)

Chromosome 2 - NC_009042.1Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene 60S ribosomal export protein NMD3 Neighboring gene hypothetical protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_009042.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genome sequence of the lignocellulose-bioconverting and xylose-fermenting yeast Pichia stipitis. Jeffries TW, et al. Nat Biotechnol, 2007 Mar. PMID 17334359

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables Atg12 activating enzyme activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables Atg8 activating enzyme activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in C-terminal protein lipidation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in autophagosome assembly IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in autophagy of mitochondrion IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in cellular response to nitrogen starvation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in piecemeal microautophagy of the nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein modification by small protein conjugation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in phagophore assembly site IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Names
Autophagy-related protein 7 (Autophagy-related E1-like activating enzyme ATG7)
XP_001383035.2
  • go_funtion catalytic activity

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_009042.1 Reference assembly

    Range
    1395895..1397853 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_001382998.1 → XP_001383035.2  Autophagy-related protein 7 (Autophagy-related E1-like activating enzyme ATG7) [Scheffersomyces stipitis CBS 6054]

    See identical proteins and their annotated locations for XP_001383035.2

    Status: PROVISIONAL

    UniProtKB/Swiss-Prot
    A3LPA1
    Conserved Domains (1) summary
    TIGR01381
    Location:15 → 633
    E1_like_apg7; E1-like protein-activating enzyme Gsa7p/Apg7p
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
A3LPA1.2

Gene LinkOut

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Molecular Biology Databases
Research Materials