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LOC482391 Uncharacterized LOC482391 [ Canis lupus familiaris (dog) ]

Gene ID: 482391, updated on 9-Feb-2024

Summary

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Gene symbol
LOC482391
Gene description
Uncharacterized LOC482391
Gene type
protein coding
RefSeq status
MODEL
Organism
Canis lupus familiaris (sub-species: familiaris)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
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Genomic context

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Location:
chromosome: 14
Exon count:
11
Annotation release Status Assembly Chr Location
106 current ROS_Cfam_1.0 (GCF_014441545.1) 14 NC_051818.1 (44889626..44955299, complement)
106 current Dog10K_Boxer_Tasha (GCF_000002285.5) 14 NC_006596.4 (44385656..44450680, complement)
106 current UU_Cfam_GSD_1.0 (GCF_011100685.1) 14 NC_049235.1 (45049246..45114585, complement)
106 current UMICH_Zoey_3.1 (GCF_005444595.1) 14 NC_049274.1 (44994620..45059628, complement)
106 current UNSW_CanFamBas_1.0 (GCF_013276365.1) 14 NC_049755.1 (44708352..44740608, complement)

Chromosome 14 - NC_051818.1Genomic Context describing neighboring genes Neighboring gene LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated Neighboring gene AVL9 cell migration associated Neighboring gene uncharacterized LOC100686198 Neighboring gene uncharacterized LOC119874512 Neighboring gene kelch repeat and BTB domain containing 2 Neighboring gene uncharacterized LOC111098819 Neighboring gene FKBP prolyl isomerase 9 Neighboring gene uncharacterized LOC119866550 Neighboring gene 5'-nucleotidase, cytosolic IIIA

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Markers

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in RNA splicing IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
kelch repeat and BTB domain-containing protein 2; retinitis pigmentosa 9 protein

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ROS_Cfam_1.0

Genomic

  1. NC_051818.1 Reference ROS_Cfam_1.0

    Range
    44889626..44955299 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038686903.1 → XP_038542831.1  retinitis pigmentosa 9 protein

    UniProtKB/TrEMBL
    A0A8C0QVF8

  2. XM_038686904.1 → XP_038542832.1  retinitis pigmentosa 9 protein

    UniProtKB/TrEMBL
    A0A8C0QVF8

  3. XM_038686902.1 → XP_038542830.1  retinitis pigmentosa 9 protein

    UniProtKB/TrEMBL
    A0A8C0QVF8

Alternate UMICH_Zoey_3.1

Genomic

  1. NC_049274.1 Alternate UMICH_Zoey_3.1

    Range
    44994620..45059628 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038495016.1 → XP_038350944.1  retinitis pigmentosa 9 protein

  2. XM_038495017.1 → XP_038350945.1  retinitis pigmentosa 9 protein

Alternate UNSW_CanFamBas_1.0

Genomic

  1. NC_049755.1 Alternate UNSW_CanFamBas_1.0

    Range
    44708352..44740608 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038621224.1 → XP_038477152.1  retinitis pigmentosa 9 protein

  2. XM_038621225.1 → XP_038477153.1  retinitis pigmentosa 9 protein

Alternate UU_Cfam_GSD_1.0

Genomic

  1. NC_049235.1 Alternate UU_Cfam_GSD_1.0

    Range
    45049246..45114585 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038557283.1 → XP_038413211.1  retinitis pigmentosa 9 protein

    UniProtKB/TrEMBL
    A0A8C0QVF8

  2. XM_038557284.1 → XP_038413212.1  retinitis pigmentosa 9 protein

    UniProtKB/TrEMBL
    A0A8C0QVF8

Alternate Dog10K_Boxer_Tasha Primary Assembly

Genomic

  1. NC_006596.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

    Range
    44385656..44450680 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038434210.1 → XP_038290138.1  retinitis pigmentosa 9 protein

    UniProtKB/TrEMBL
    A0A8C0QVF8

  2. XM_038434221.1 → XP_038290149.1  retinitis pigmentosa 9 protein

    UniProtKB/TrEMBL
    A0A8C0QVF8

  3. XM_038434230.1 → XP_038290158.1  retinitis pigmentosa 9 protein

    UniProtKB/TrEMBL
    A0A8C0QVF8
Nucleotide Protein
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