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Pkg21D Protein kinase, cGMP-dependent at 21D [ Drosophila pseudoobscura ]

Gene ID: 4817545, updated on 15-May-2024

Summary

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Gene symbol
Pkg21D
Gene description
Protein kinase, cGMP-dependent at 21D
See related
EnsemblRapid:LOC4817545
Gene type
protein coding
RefSeq status
MODEL
Organism
Drosophila pseudoobscura
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
Orthologs
fruit fly all
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Genomic context

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See Pkg21D in Genome Data Viewer
Location:
chromosome: 4
Exon count:
5
Annotation release Status Assembly Chr Location
104 current UCI_Dpse_MV25 (GCF_009870125.1) 4 NC_046681.1 (26826394..26830612)

Chromosome 4 - NC_046681.1Genomic Context describing neighboring genes Neighboring gene defective proboscis extension response 3 Neighboring gene uncharacterized LOC26532640 Neighboring gene uncharacterized LOC6903150 Neighboring gene xylulose kinase Neighboring gene bromodomain-containing protein DDB_G0270170 Neighboring gene Gustatory receptor 21a

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_046681.1 Chromosome 4 Reference UCI_Dpse_MV25 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Evaluation of different reference based annotation strategies using RNA-Seq - a case study in Drososphila pseudoobscura. Palmieri N, et al. PLoS One, 2012. PMID 23056304, Free PMC Article
  2. Evolution of genes and genomes on the Drosophila phylogeny. Drosophila 12 Genomes Consortium, et al. Nature, 2007 Nov 8. PMID 17994087

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables cGMP-dependent protein kinase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein phosphorylation IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
cGMP-dependent protein kinase, isozyme 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Drosophila pseudoobscura Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference UCI_Dpse_MV25 Primary Assembly

Genomic

  1. NC_046681.1 Reference UCI_Dpse_MV25 Primary Assembly

    Range
    26826394..26830612
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_001356918.4 → XP_001356954.3  cGMP-dependent protein kinase, isozyme 1

    UniProtKB/TrEMBL
    A0A6I8UKK4
    Related
    XP_001356954.3, XM_001356918.4
    Conserved Domains (3) summary
    smart00133
    Location:725 → 774
    S_TK_X; Extension to Ser/Thr-type protein kinases
    cd00038
    Location:306 → 421
    CAP_ED; effector domain of the CAP family of transcription factors; members include CAP (or cAMP receptor protein (CRP)), which binds cAMP, FNR (fumarate and nitrate reduction), which uses an iron-sulfur cluster to sense oxygen) and CooA, a heme containing CO ...
    cd05572
    Location:469 → 730
    STKc_cGK; Catalytic domain of the Serine/Threonine Kinase, cGMP-dependent protein kinase (cGK or PKG)
Nucleotide Protein Strain
Heading Accession and Version

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