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Prosalpha4 proteasome alpha4 subunit [ Drosophila pseudoobscura ]

Gene ID: 4814783, updated on 22-May-2024

Summary

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Gene symbol
Prosalpha4
Gene description
proteasome alpha4 subunit
See related
EnsemblRapid:LOC4814783
Gene type
protein coding
RefSeq status
MODEL
Organism
Drosophila pseudoobscura
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
Orthologs
fruit fly all
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Genomic context

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See Prosalpha4 in Genome Data Viewer
Location:
chromosome: X
Exon count:
3
Annotation release Status Assembly Chr Location
104 current UCI_Dpse_MV25 (GCF_009870125.1) X NC_046683.1 (7566742..7568073)

Chromosome X - NC_046683.1Genomic Context describing neighboring genes Neighboring gene 27 kDa hemolymph protein Neighboring gene XK-related protein 6 Neighboring gene serine-rich adhesin for platelets Neighboring gene probable sulfite oxidase, mitochondrial Neighboring gene L-xylulose reductase

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_046683.1 Chromosome X Reference UCI_Dpse_MV25 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Adaptive evolution of genes duplicated from the Drosophila pseudoobscura neo-X chromosome. Meisel RP, et al. Mol Biol Evol, 2010 Aug. PMID 20351054, Free PMC Article
  2. Evolution of genes and genomes on the Drosophila phylogeny. Drosophila 12 Genomes Consortium, et al. Nature, 2007 Nov 8. PMID 17994087

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in ubiquitin-dependent protein catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of proteasome core complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of proteasome core complex, alpha-subunit complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
proteasome subunit alpha type-7-1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Drosophila pseudoobscura Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference UCI_Dpse_MV25 Primary Assembly

Genomic

  1. NC_046683.1 Reference UCI_Dpse_MV25 Primary Assembly

    Range
    7566742..7568073
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_001355070.4 → XP_001355106.2  proteasome subunit alpha type-7-1

    See identical proteins and their annotated locations for XP_001355106.2

    UniProtKB/TrEMBL
    D6QYD6, Q29GE7
    Related
    XP_001355106.2, XM_001355070.4
    Conserved Domains (2) summary
    PRK03996
    Location:5 → 232
    PRK03996; proteasome subunit alpha; Provisional
    cd03755
    Location:5 → 213
    proteasome_alpha_type_7; proteasome_alpha_type_7. The 20S proteasome, multisubunit proteolytic complex, is the central enzyme of nonlysosomal protein degradation in both the cytosol and nucleus. It is composed of 28 subunits arranged as four homoheptameric rings that stack on ...
Nucleotide Protein Strain
Heading Accession and Version

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