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Vps8 vacuolar protein sorting 8 [ Drosophila pseudoobscura ]

Gene ID: 4814098, updated on 23-May-2024

Summary

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Gene symbol
Vps8
Gene description
vacuolar protein sorting 8
See related
EnsemblRapid:LOC4814098
Gene type
protein coding
RefSeq status
MODEL
Organism
Drosophila pseudoobscura
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
Orthologs
fruit fly all
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Genomic context

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See Vps8 in Genome Data Viewer
Location:
chromosome: X
Exon count:
3
Annotation release Status Assembly Chr Location
104 current UCI_Dpse_MV25 (GCF_009870125.1) X NC_046683.1 (66673854..66677975)

Chromosome X - NC_046683.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC4814081 Neighboring gene N-deacetylase and N-sulfotransferase sfl Neighboring gene BTB/POZ domain-containing protein 9-like Neighboring gene zinc finger protein 595 Neighboring gene regulator of MON1-CCZ1 complex protein bulli

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_046683.1 Chromosome X Reference UCI_Dpse_MV25 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Evolution of genes and genomes on the Drosophila phylogeny. Drosophila 12 Genomes Consortium, et al. Nature, 2007 Nov 8. PMID 17994087

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in endosomal vesicle fusion IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein targeting to vacuole IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of HOPS complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in late endosome IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
vacuolar protein sorting-associated protein 8 homolog

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Drosophila pseudoobscura Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference UCI_Dpse_MV25 Primary Assembly

Genomic

  1. NC_046683.1 Reference UCI_Dpse_MV25 Primary Assembly

    Range
    66673854..66677975
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_001354193.4 → XP_001354229.3  vacuolar protein sorting-associated protein 8 homolog

    UniProtKB/TrEMBL
    A0A6I8UEH7
    Related
    XP_001354229.3, XM_001354193.4
    Conserved Domains (4) summary
    sd00039
    Location:163 → 203
    7WD40; WD40 repeat [structural motif]
    pfam12816
    Location:554 → 726
    Vps8; Golgi CORVET complex core vacuolar protein 8
    pfam13639
    Location:1148 → 1192
    zf-RING_2; Ring finger domain
    cl26078
    Location:949 → 1017
    Clathrin; Region in Clathrin and VPS
Nucleotide Protein Strain
Heading Accession and Version

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