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LOC4812282 4-hydroxyphenylpyruvate dioxygenase [ Drosophila pseudoobscura ]

Gene ID: 4812282, updated on 10-May-2024

Summary

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Gene symbol
LOC4812282
Gene description
4-hydroxyphenylpyruvate dioxygenase
See related
EnsemblRapid:LOC4812282
Gene type
protein coding
RefSeq status
MODEL
Organism
Drosophila pseudoobscura
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
Orthologs
fruit fly all
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Genomic context

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See LOC4812282 in Genome Data Viewer
Location:
chromosome: X
Exon count:
5
Annotation release Status Assembly Chr Location
104 current UCI_Dpse_MV25 (GCF_009870125.1) X NC_046683.1 (61312288..61314021)

Chromosome X - NC_046683.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC4812443 Neighboring gene uncharacterized LOC4812261 Neighboring gene uncharacterized LOC117184887 Neighboring gene uncharacterized LOC4812281 Neighboring gene presenilin homolog Neighboring gene mitochondrial ribosomal protein L15 Neighboring gene golgi glycoprotein 1 Neighboring gene esterase B1

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_046683.1 Chromosome X Reference UCI_Dpse_MV25 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Evaluation of different reference based annotation strategies using RNA-Seq - a case study in Drososphila pseudoobscura. Palmieri N, et al. PLoS One, 2012. PMID 23056304, Free PMC Article
  2. Evolution of genes and genomes on the Drosophila phylogeny. Drosophila 12 Genomes Consortium, et al. Nature, 2007 Nov 8. PMID 17994087

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables 4-hydroxyphenylpyruvate dioxygenase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in tyrosine catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in endoplasmic reticulum membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
4-hydroxyphenylpyruvate dioxygenase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Drosophila pseudoobscura Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference UCI_Dpse_MV25 Primary Assembly

Genomic

  1. NC_046683.1 Reference UCI_Dpse_MV25 Primary Assembly

    Range
    61312288..61314021
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_001352944.4 → XP_001352980.4  4-hydroxyphenylpyruvate dioxygenase

    UniProtKB/TrEMBL
    A0A6I8UBT2
    Related
    XP_001352980.4, XM_001352944.4
    Conserved Domains (1) summary
    TIGR01263
    Location:17 → 380
    4HPPD; 4-hydroxyphenylpyruvate dioxygenase
Nucleotide Protein Strain
Heading Accession and Version

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