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Csgalnact Chondroitin sulfate N-acetylgalactosaminyltransferase [ Drosophila pseudoobscura ]

Gene ID: 4804207, updated on 22-May-2024

Summary

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Gene symbol
Csgalnact
Gene description
Chondroitin sulfate N-acetylgalactosaminyltransferase
See related
EnsemblRapid:LOC4804207
Gene type
protein coding
RefSeq status
MODEL
Organism
Drosophila pseudoobscura
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
Orthologs
fruit fly all
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Genomic context

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See Csgalnact in Genome Data Viewer
Location:
chromosome: 3
Exon count:
5
Annotation release Status Assembly Chr Location
104 current UCI_Dpse_MV25 (GCF_009870125.1) 3 NC_046680.1 (10719496..10727112)

Chromosome 3 - NC_046680.1Genomic Context describing neighboring genes Neighboring gene histidine decarboxylase Neighboring gene uncharacterized LOC6898409 Neighboring gene uncharacterized LOC4804205 Neighboring gene Vesicle-associated membrane protein synaptobrevin Neighboring gene keratin, type I cytoskeletal 9 Neighboring gene uncharacterized LOC117183711

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_046680.1 Chromosome 3 Reference UCI_Dpse_MV25 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Evolution of genes and genomes on the Drosophila phylogeny. Drosophila 12 Genomes Consortium, et al. Nature, 2007 Nov 8. PMID 17994087

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables glucuronosyl-N-acetylgalactosaminyl-proteoglycan 4-beta-N-acetylgalactosaminyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in chondroitin sulfate biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi cisterna membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
chondroitin sulfate N-acetylgalactosaminyltransferase 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Drosophila pseudoobscura Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference UCI_Dpse_MV25 Primary Assembly

Genomic

  1. NC_046680.1 Reference UCI_Dpse_MV25 Primary Assembly

    Range
    10719496..10727112
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_001360767.4 → XP_001360804.3  chondroitin sulfate N-acetylgalactosaminyltransferase 2

    UniProtKB/TrEMBL
    A0A6I8UUF1
    Related
    XP_001360804.3, XM_001360767.4
    Conserved Domains (1) summary
    cl11394
    Location:60 → 520
    Glyco_tranf_GTA_type; Glycosyltransferase family A (GT-A) includes diverse families of glycosyl transferases with a common GT-A type structural fold
Nucleotide Protein Strain
Heading Accession and Version

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