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Tret1-1 Trehalose transporter 1-1 [ Drosophila pseudoobscura ]

Gene ID: 4803914, updated on 23-May-2024

Summary

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Gene symbol
Tret1-1
Gene description
Trehalose transporter 1-1
See related
EnsemblRapid:LOC4803914
Gene type
protein coding
RefSeq status
MODEL
Organism
Drosophila pseudoobscura
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
Orthologs
fruit fly all
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Genomic context

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See Tret1-1 in Genome Data Viewer
Location:
chromosome: 3
Exon count:
9
Annotation release Status Assembly Chr Location
104 current UCI_Dpse_MV25 (GCF_009870125.1) 3 NC_046680.1 (8464530..8473094)

Chromosome 3 - NC_046680.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC4803915 Neighboring gene Regulator of cullins 2 Neighboring gene transfer RNA methionine (anticodon CAU) Neighboring gene vacuolar ATPase assembly integral membrane protein VMA21 homolog Neighboring gene uncharacterized LOC6898293

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_046680.1 Chromosome 3 Reference UCI_Dpse_MV25 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Evaluation of different reference based annotation strategies using RNA-Seq - a case study in Drososphila pseudoobscura. Palmieri N, et al. PLoS One, 2012. PMID 23056304, Free PMC Article
  2. Evolution of genes and genomes on the Drosophila phylogeny. Drosophila 12 Genomes Consortium, et al. Nature, 2007 Nov 8. PMID 17994087

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables sugar transmembrane transporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in carbohydrate transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in transmembrane transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
facilitated trehalose transporter Tret1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Drosophila pseudoobscura Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference UCI_Dpse_MV25 Primary Assembly

Genomic

  1. NC_046680.1 Reference UCI_Dpse_MV25 Primary Assembly

    Range
    8464530..8473094
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_001360522.4 → XP_001360559.4  facilitated trehalose transporter Tret1 isoform X1

    UniProtKB/Swiss-Prot
    Q291H8
    UniProtKB/TrEMBL
    A0A6I8VWH8
    Related
    XP_001360559.4, XM_001360522.4
    Conserved Domains (1) summary
    cd17358
    Location:408 → 843
    MFS_GLUT6_8_Class3_like; Glucose transporter (GLUT) types 6 and 8, Class 3 GLUTs, and similar transporters of the Major Facilitator Superfamily

  2. XM_033379043.1 → XP_033234934.1  facilitated trehalose transporter Tret1 isoform X1

    UniProtKB/Swiss-Prot
    Q291H8
    UniProtKB/TrEMBL
    A0A6I8VWH8
    Related
    XP_033234934.1, XM_033379043.1
    Conserved Domains (1) summary
    cd17358
    Location:408 → 843
    MFS_GLUT6_8_Class3_like; Glucose transporter (GLUT) types 6 and 8, Class 3 GLUTs, and similar transporters of the Major Facilitator Superfamily

  3. XM_015183947.2 → XP_015039433.1  facilitated trehalose transporter Tret1 isoform X2

    UniProtKB/TrEMBL
    A0A6I8VE92
    Related
    XP_015039433.1, XM_015183947.2
    Conserved Domains (1) summary
    cl26863
    Location:31 → 467
    Sugar_tr; Sugar (and other) transporter
Nucleotide Protein Strain
Heading Accession and Version

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