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Tmtc4 Transmembrane O-mannosyltransferase targeting cadherins 4 [ Drosophila pseudoobscura ]

Gene ID: 4800693, updated on 16-May-2024

Summary

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Gene symbol
Tmtc4
Gene description
Transmembrane O-mannosyltransferase targeting cadherins 4
See related
EnsemblRapid:LOC4800693
Gene type
protein coding
RefSeq status
MODEL
Organism
Drosophila pseudoobscura
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
Orthologs
fruit fly all
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Genomic context

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See Tmtc4 in Genome Data Viewer
Location:
chromosome: 2
Exon count:
1
Annotation release Status Assembly Chr Location
104 current UCI_Dpse_MV25 (GCF_009870125.1) 2 NC_046679.1 (4400929..4403774)

Chromosome 2 - NC_046679.1Genomic Context describing neighboring genes Neighboring gene zinc finger protein 28 Neighboring gene uncharacterized LOC13036356 Neighboring gene trafficking protein particle complex subunit Trs33 Neighboring gene cysteine protease ATG4D Neighboring gene 3-hydroxyisobutyryl-CoA hydrolase, mitochondrial Neighboring gene conserved oligomeric Golgi complex subunit 2 Neighboring gene aprataxin and PNK-like factor Neighboring gene Translin associated factor X

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_046679.1 Chromosome 2 Reference UCI_Dpse_MV25 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Evolution of genes and genomes on the Drosophila phylogeny. Drosophila 12 Genomes Consortium, et al. Nature, 2007 Nov 8. PMID 17994087

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables mannosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in endoplasmic reticulum unfolded protein response IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein O-linked mannosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
protein O-mannosyl-transferase TMTC4

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Drosophila pseudoobscura Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference UCI_Dpse_MV25 Primary Assembly

Genomic

  1. NC_046679.1 Reference UCI_Dpse_MV25 Primary Assembly

    Range
    4400929..4403774
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_001357882.4 → XP_001357919.3  protein O-mannosyl-transferase TMTC4

    UniProtKB/TrEMBL
    A0A6I8UMU6
    Related
    XP_001357919.3, XM_001357882.4
    Conserved Domains (3) summary
    COG0457
    Location:439 → 706
    TPR; Tetratricopeptide (TPR) repeat [General function prediction only]
    sd00006
    Location:485 → 511
    TPR; TPR repeat [structural motif]
    pfam08409
    Location:263 → 336
    DUF1736; Domain of unknown function (DUF1736)
Nucleotide Protein Strain
Heading Accession and Version

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