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Vps15 vacuolar protein sorting 15 [ Drosophila pseudoobscura ]

Gene ID: 4800362, updated on 22-May-2024

Summary

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Gene symbol
Vps15
Gene description
vacuolar protein sorting 15
See related
EnsemblRapid:LOC4800362
Gene type
protein coding
RefSeq status
MODEL
Organism
Drosophila pseudoobscura
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
Orthologs
fruit fly all
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Genomic context

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See Vps15 in Genome Data Viewer
Location:
chromosome: 2
Exon count:
9
Annotation release Status Assembly Chr Location
104 current UCI_Dpse_MV25 (GCF_009870125.1) 2 NC_046679.1 (1757207..1762193)

Chromosome 2 - NC_046679.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC117183304 Neighboring gene luciferin sulfotransferase-like Neighboring gene uncharacterized LOC4800361 Neighboring gene G2/mitotic-specific cyclin-B3 Neighboring gene calcium-binding protein P

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_046679.1 Chromosome 2 Reference UCI_Dpse_MV25 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Evolution of genes and genomes on the Drosophila phylogeny. Drosophila 12 Genomes Consortium, et al. Nature, 2007 Nov 8. PMID 17994087

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein serine/threonine kinase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in autophagy of peroxisome IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in late endosome to vacuole transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in macroautophagy IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein phosphorylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein targeting to vacuole IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in late endosome IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus-vacuole junction IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of phosphatidylinositol 3-kinase complex, class III, type I IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of phosphatidylinositol 3-kinase complex, class III, type II IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
phosphoinositide 3-kinase regulatory subunit 4

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Drosophila pseudoobscura Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference UCI_Dpse_MV25 Primary Assembly

Genomic

  1. NC_046679.1 Reference UCI_Dpse_MV25 Primary Assembly

    Range
    1757207..1762193
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_033376602.1 → XP_033232493.1  phosphoinositide 3-kinase regulatory subunit 4

    UniProtKB/TrEMBL
    A0A6I8VNP7
    Related
    XP_033232493.1, XM_033376602.1
    Conserved Domains (5) summary
    smart00320
    Location:1315 → 1346
    WD40; WD40 repeats
    cd13980
    Location:27 → 325
    STKc_Vps15; Catalytic domain of the Serine/Threonine kinase, Vacuolar protein sorting-associated protein 15
    sd00044
    Location:486 → 511
    HEAT; HEAT repeat [structural motif]
    sd00039
    Location:1025 → 1068
    7WD40; WD40 repeat [structural motif]
    cl29593
    Location:958 → 1245
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
Nucleotide Protein Strain
Heading Accession and Version

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