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LOC4800238 WD repeat-containing protein 44 [ Drosophila pseudoobscura ]

Gene ID: 4800238, updated on 10-May-2024

Summary

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Gene symbol
LOC4800238
Gene description
WD repeat-containing protein 44
See related
EnsemblRapid:LOC4800238
Gene type
protein coding
RefSeq status
MODEL
Organism
Drosophila pseudoobscura
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
Orthologs
fruit fly all
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Genomic context

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See LOC4800238 in Genome Data Viewer
Location:
chromosome: 2
Exon count:
9
Annotation release Status Assembly Chr Location
104 current UCI_Dpse_MV25 (GCF_009870125.1) 2 NC_046679.1 (690510..695056, complement)

Chromosome 2 - NC_046679.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC4800272 Neighboring gene mucin-5AC Neighboring gene uncharacterized LOC26532136 Neighboring gene uncharacterized LOC117185055 Neighboring gene Zinc transporter Zip99C Neighboring gene small nucleolar RNA R442 Neighboring gene ribosomal protein S8

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_046679.1 Chromosome 2 Reference UCI_Dpse_MV25 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Evaluation of different reference based annotation strategies using RNA-Seq - a case study in Drososphila pseudoobscura. Palmieri N, et al. PLoS One, 2012. PMID 23056304, Free PMC Article
  2. Evolution of genes and genomes on the Drosophila phylogeny. Drosophila 12 Genomes Consortium, et al. Nature, 2007 Nov 8. PMID 17994087

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
WD repeat-containing protein 44

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Drosophila pseudoobscura Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference UCI_Dpse_MV25 Primary Assembly

Genomic

  1. NC_046679.1 Reference UCI_Dpse_MV25 Primary Assembly

    Range
    690510..695056 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_033384590.1 → XP_033240481.1  WD repeat-containing protein 44 isoform X2

    UniProtKB/TrEMBL
    A0A6I8WAP7
    Related
    XP_033240481.1, XM_033384590.1
    Conserved Domains (2) summary
    sd00039
    Location:691 → 749
    7WD40; WD40 repeat [structural motif]
    cl29593
    Location:688 → 1030
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...

  2. XM_003736177.3 → XP_003736225.2  WD repeat-containing protein 44 isoform X1

    UniProtKB/TrEMBL
    A0A6I8V6G8
    Related
    XP_003736225.2, XM_003736177.3
    Conserved Domains (2) summary
    cd00200
    Location:718 → 1060
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
    sd00039
    Location:721 → 779
    7WD40; WD40 repeat [structural motif]
Nucleotide Protein Strain
Heading Accession and Version

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