MRPL18 mitochondrial ribosomal protein L18 [Canis lupus familiaris (dog)] - Gene

Summary

Official Symbol: MRPL18provided by VGNC
Official Full Name: mitochondrial ribosomal protein L18provided by VGNC
Primary source: VGNC:VGNC:43382
See related: Ensembl:ENSCAFG00845001976
Gene type: protein coding
RefSeq status: MODEL
Organism: Canis lupus familiaris (sub-species: familiaris)
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
Orthologs: human mouse all
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Genomic context

Location:: chromosome: 1

Exon count:: 4

Annotation release	Status	Assembly	Chr	Location
106	current	ROS_Cfam_1.0 (GCF_014441545.1)	1	NC_051805.1 (49223445..49228365)
106	current	Dog10K_Boxer_Tasha (GCF_000002285.5)	1	NC_006583.4 (49880740..49885636)
106	current	UU_Cfam_GSD_1.0 (GCF_011100685.1)	1	NC_049222.1 (49592154..49597020)
106	current	UMICH_Zoey_3.1 (GCF_005444595.1)	1	NC_049261.1 (49105805..49110739)
106	current	UNSW_CanFamBas_1.0 (GCF_013276365.1)	1	NC_049742.1 (48976978..48981811)

Chromosome 1 - NC_051805.1 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

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Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

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General gene information

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Homology

NCBI Orthologs

Orthologs from OrthoDB

Gene Ontology Provided by RefSeq

Function	Evidence Code	Pubs
enables 5S rRNA binding	IEA Inferred from Electronic Annotation more info	PubMed
enables structural constituent of ribosome	IEA Inferred from Electronic Annotation more info	PubMed

Process	Evidence Code	Pubs
involved_in translation	IEA Inferred from Electronic Annotation more info	PubMed

Component	Evidence Code	Pubs
located_in mitochondrion	IEA Inferred from Electronic Annotation more info	PubMed
located_in ribosome	IEA Inferred from Electronic Annotation more info	PubMed

General protein information

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Preferred Names: 39S ribosomal protein L18, mitochondrial

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ROS_Cfam_1.0

Genomic

NC_051805.1 Reference ROS_Cfam_1.0

Range

49223445..49228365

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GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

XM_038654576.1 → XP_038510504.1 39S ribosomal protein L18, mitochondrial isoform X3
XM_038654575.1 → XP_038510503.1 39S ribosomal protein L18, mitochondrial isoform X2

UniProtKB/TrEMBL

A0A8C0KZ76

Conserved Domains (1) summary

cd00432
Location:82 → 160

Ribosomal_L18_L5e; Ribosomal L18/L5e: L18 (L5e) is a ribosomal protein found in the central protuberance (CP) of the large subunit. L18 binds 5S rRNA and induces a conformational change that stimulates the binding of L5 to 5S rRNA. Association of 5S rRNA with 23S rRNA ...
XM_038654574.1 → XP_038510502.1 39S ribosomal protein L18, mitochondrial isoform X1

UniProtKB/TrEMBL

A0A8C0KZ76, A0A8C0N4X7, A0A8I3MHG8

Related

ENSCAFP00845002732.1, ENSCAFT00845003447.1

Conserved Domains (1) summary

cd00432
Location:82 → 184

Ribosomal_L18_L5e; Ribosomal L18/L5e: L18 (L5e) is a ribosomal protein found in the central protuberance (CP) of the large subunit. L18 binds 5S rRNA and induces a conformational change that stimulates the binding of L5 to 5S rRNA. Association of 5S rRNA with 23S rRNA ...

Alternate UMICH_Zoey_3.1

Genomic

NC_049261.1 Alternate UMICH_Zoey_3.1

Range

49105805..49110739

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GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

XM_038465814.1 → XP_038321742.1 39S ribosomal protein L18, mitochondrial isoform X3
XM_038465813.1 → XP_038321741.1 39S ribosomal protein L18, mitochondrial isoform X2

Conserved Domains (1) summary

cd00432
Location:82 → 160

Ribosomal_L18_L5e; Ribosomal L18/L5e: L18 (L5e) is a ribosomal protein found in the central protuberance (CP) of the large subunit. L18 binds 5S rRNA and induces a conformational change that stimulates the binding of L5 to 5S rRNA. Association of 5S rRNA with 23S rRNA ...
XM_038465812.1 → XP_038321740.1 39S ribosomal protein L18, mitochondrial isoform X1

Conserved Domains (1) summary

cd00432
Location:82 → 184

Ribosomal_L18_L5e; Ribosomal L18/L5e: L18 (L5e) is a ribosomal protein found in the central protuberance (CP) of the large subunit. L18 binds 5S rRNA and induces a conformational change that stimulates the binding of L5 to 5S rRNA. Association of 5S rRNA with 23S rRNA ...

Alternate UNSW_CanFamBas_1.0

Genomic

NC_049742.1 Alternate UNSW_CanFamBas_1.0

Range

48976978..48981811

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GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

XM_038590782.1 → XP_038446710.1 39S ribosomal protein L18, mitochondrial isoform X3
XM_038590781.1 → XP_038446709.1 39S ribosomal protein L18, mitochondrial isoform X2

Conserved Domains (1) summary

cd00432
Location:82 → 160

Ribosomal_L18_L5e; Ribosomal L18/L5e: L18 (L5e) is a ribosomal protein found in the central protuberance (CP) of the large subunit. L18 binds 5S rRNA and induces a conformational change that stimulates the binding of L5 to 5S rRNA. Association of 5S rRNA with 23S rRNA ...
XM_038590780.1 → XP_038446708.1 39S ribosomal protein L18, mitochondrial isoform X1

Conserved Domains (1) summary

cd00432
Location:82 → 184

Ribosomal_L18_L5e; Ribosomal L18/L5e: L18 (L5e) is a ribosomal protein found in the central protuberance (CP) of the large subunit. L18 binds 5S rRNA and induces a conformational change that stimulates the binding of L5 to 5S rRNA. Association of 5S rRNA with 23S rRNA ...

Alternate UU_Cfam_GSD_1.0

Genomic

NC_049222.1 Alternate UU_Cfam_GSD_1.0

Range

49592154..49597020

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GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

XM_038526491.1 → XP_038382419.1 39S ribosomal protein L18, mitochondrial isoform X3
XM_038526490.1 → XP_038382418.1 39S ribosomal protein L18, mitochondrial isoform X2

UniProtKB/TrEMBL

A0A8C0KZ76

Conserved Domains (1) summary

cd00432
Location:82 → 160

Ribosomal_L18_L5e; Ribosomal L18/L5e: L18 (L5e) is a ribosomal protein found in the central protuberance (CP) of the large subunit. L18 binds 5S rRNA and induces a conformational change that stimulates the binding of L5 to 5S rRNA. Association of 5S rRNA with 23S rRNA ...
XM_038526489.1 → XP_038382417.1 39S ribosomal protein L18, mitochondrial isoform X1

UniProtKB/TrEMBL

A0A8C0KZ76, A0A8C0N4X7, A0A8I3MHG8

Conserved Domains (1) summary

cd00432
Location:82 → 184

Ribosomal_L18_L5e; Ribosomal L18/L5e: L18 (L5e) is a ribosomal protein found in the central protuberance (CP) of the large subunit. L18 binds 5S rRNA and induces a conformational change that stimulates the binding of L5 to 5S rRNA. Association of 5S rRNA with 23S rRNA ...

Alternate Dog10K_Boxer_Tasha Primary Assembly

Genomic

NC_006583.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

Range

49880740..49885636

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GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

XM_038527941.1 → XP_038383869.1 39S ribosomal protein L18, mitochondrial isoform X3
XM_005615558.4 → XP_005615615.1 39S ribosomal protein L18, mitochondrial isoform X2

UniProtKB/TrEMBL

A0A8C0KZ76

Conserved Domains (1) summary

cd00432
Location:82 → 160

Ribosomal_L18_L5e; Ribosomal L18/L5e: L18 (L5e) is a ribosomal protein found in the central protuberance (CP) of the large subunit. L18 binds 5S rRNA and induces a conformational change that stimulates the binding of L5 to 5S rRNA. Association of 5S rRNA with 23S rRNA ...
XM_003432548.4 → XP_003432596.1 39S ribosomal protein L18, mitochondrial isoform X1

UniProtKB/TrEMBL

A0A8C0KZ76, A0A8C0N4X7, A0A8I3MHG8

Conserved Domains (1) summary

cd00432
Location:82 → 184

Ribosomal_L18_L5e; Ribosomal L18/L5e: L18 (L5e) is a ribosomal protein found in the central protuberance (CP) of the large subunit. L18 binds 5S rRNA and induces a conformational change that stimulates the binding of L5 to 5S rRNA. Association of 5S rRNA with 23S rRNA ...