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SLC4A5 solute carrier family 4 member 5 [ Pan troglodytes (chimpanzee) ]

Gene ID: 470408, updated on 29-Mar-2024

Summary

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Official Symbol
SLC4A5provided by VGNC
Official Full Name
solute carrier family 4 member 5provided by VGNC
Primary source
VGNC:VGNC:7713
Locus tag
CK820_G0035668
See related
Ensembl:ENSPTRG00000012082
Gene type
protein coding
RefSeq status
MODEL
Organism
Pan troglodytes
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pan
Orthologs
human mouse all
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Genomic context

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See SLC4A5 in Genome Data Viewer
Location:
chromosome: 2A
Exon count:
33
Annotation release Status Assembly Chr Location
RS_2024_02 current NHGRI_mPanTro3-v2.0_pri (GCF_028858775.2) 12 NC_072410.2 (48395710..48540715)
RS_2023_04 previous assembly NHGRI_mPanTro3-v1.1-hic.freeze_pri (GCF_028858775.1) 2A NC_072399.1 (74312515..74457456, complement)

Chromosome 12 - NC_072410.2Genomic Context describing neighboring genes Neighboring gene chromosome 2A C2orf81 homolog Neighboring gene uncharacterized LOC134807883 Neighboring gene high mobility group protein HMG-I/HMG-Y-like Neighboring gene dynactin subunit 1 Neighboring gene U6 spliceosomal RNA Neighboring gene keratin, type I cytoskeletal 18-like Neighboring gene methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2, methenyltetrahydrofolate cyclohydrolase Neighboring gene MOB kinase activator 1A

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables monoatomic anion transmembrane transporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables sodium:bicarbonate symporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables solute:inorganic anion antiporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in bicarbonate transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in monoatomic anion transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of intracellular pH IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in renal system process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in transmembrane transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
electrogenic sodium bicarbonate cotransporter 4
Names
sodium bicarbonate transporter 4
solute carrier family 4 (sodium bicarbonate cotransporter), member 5
solute carrier family 4, sodium bicarbonate cotransporter, member 4
solute carrier family 4, sodium bicarbonate cotransporter, member 5

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_028858775.2-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

Genomic

  1. NC_072410.2 Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

    Range
    48395710..48540715
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_054678546.2 → XP_054534521.1  electrogenic sodium bicarbonate cotransporter 4 isoform X1

  2. XM_016948816.4 → XP_016804305.3  electrogenic sodium bicarbonate cotransporter 4 isoform X1

  3. XM_054678548.2 → XP_054534523.1  electrogenic sodium bicarbonate cotransporter 4 isoform X3

  4. XM_054678547.2 → XP_054534522.1  electrogenic sodium bicarbonate cotransporter 4 isoform X2

  5. XM_063789007.1 → XP_063645077.1  electrogenic sodium bicarbonate cotransporter 4 isoform X4

  6. XM_016948815.4 → XP_016804304.3  electrogenic sodium bicarbonate cotransporter 4 isoform X1

  7. XM_009442669.5 → XP_009440944.3  electrogenic sodium bicarbonate cotransporter 4 isoform X5

RNA

  1. XR_010149095.1 RNA Sequence

  2. XR_010149094.1 RNA Sequence

  3. XR_010149096.1 RNA Sequence

  4. XR_008546458.2 RNA Sequence

Nucleotide Protein
Heading Accession and Version

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