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ACLA_095480 tRNA isopentenyltransferase, putative [ Aspergillus clavatus NRRL 1 ]

Gene ID: 4702523, updated on 17-May-2024

Summary

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Gene symbol
ACLA_095480
Gene description
tRNA isopentenyltransferase, putative
Primary source
FungiDB:ACLA_095480
Locus tag
ACLA_095480
See related
VEuPathDB:ACLA_095480
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Aspergillus clavatus NRRL 1 (strain: NRRL 1, type-material: culture from type material of Aspergillus clavatus)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Eurotiomycetes; Eurotiomycetidae; Eurotiales; Aspergillaceae; Aspergillus; Aspergillus subgen. Fumigati
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Genomic context

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See ACLA_095480 in Genome Data Viewer
Location:
chromosome: Unknown
Exon count:
2

NW_001517095.1Genomic Context describing neighboring genes Neighboring gene RNA polymerase II Elongator subunit, putative Neighboring gene ABC transporter, putative Neighboring gene HLA class III protein Dom3z Neighboring gene DUF410 domain protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_001517095.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genomic islands in the pathogenic filamentous fungus Aspergillus fumigatus. Fedorova ND, et al. PLoS Genet, 2008 Apr 11. PMID 18404212, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables nucleic acid binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables tRNA dimethylallyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables zinc ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in tRNA modification IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in mitochondrion IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
tRNA isopentenyltransferase, putative
XP_001270041.1
  • encoded by transcript ACLA_095480A
    predicted by EVM2

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NW_001517095.1 Reference assembly

    Range
    91186..92663
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_001270040.1 → XP_001270041.1  tRNA isopentenyltransferase, putative [Aspergillus clavatus NRRL 1]

    See identical proteins and their annotated locations for XP_001270041.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A1CM28
    Conserved Domains (4) summary
    PLN02748
    Location:4 → 452
    PLN02748; tRNA dimethylallyltransferase
    COG0324
    Location:1 → 329
    MiaA; tRNA A37 N6-isopentenylltransferase MiaA [Translation, ribosomal structure and biogenesis]
    sd00020
    Location:408 → 430
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam12874
    Location:407 → 430
    zf-met; Zinc-finger of C2H2 type
Nucleotide Protein
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