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ACLA_027270 chromosome segregation protein (SepB), putative [ Aspergillus clavatus NRRL 1 ]

Gene ID: 4701064, updated on 17-May-2024

Summary

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Gene symbol
ACLA_027270
Gene description
chromosome segregation protein (SepB), putative
Primary source
FungiDB:ACLA_027270
Locus tag
ACLA_027270
See related
VEuPathDB:ACLA_027270
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Aspergillus clavatus NRRL 1 (strain: NRRL 1, type-material: culture from type material of Aspergillus clavatus)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Eurotiomycetes; Eurotiomycetidae; Eurotiales; Aspergillaceae; Aspergillus; Aspergillus subgen. Fumigati
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Genomic context

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See ACLA_027270 in Genome Data Viewer
Location:
chromosome: Unknown
Exon count:
7

NW_001517094.1Genomic Context describing neighboring genes Neighboring gene cytochrome P450, putative Neighboring gene dihydroxy-acid dehydratase, putative Neighboring gene uncharacterized protein Neighboring gene tetracycline transporter, putative

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_001517094.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genomic islands in the pathogenic filamentous fungus Aspergillus fumigatus. Fedorova ND, et al. PLoS Genet, 2008 Apr 11. PMID 18404212, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables chromatin binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in DNA repair IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in DNA-templated DNA replication IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in mitotic cell cycle IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nuclear replication fork IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
chromosome segregation protein (SepB), putative
XP_001269431.1
  • encoded by transcript ACLA_027270A
    predicted by EVM2

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NW_001517094.1 Reference assembly

    Range
    2840823..2843719
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_001269430.1 → XP_001269431.1  chromosome segregation protein (SepB), putative [Aspergillus clavatus NRRL 1]

    See identical proteins and their annotated locations for XP_001269431.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A1CQT4
    Conserved Domains (4) summary
    COG2319
    Location:12 → 301
    WD40; WD40 repeat [General function prediction only]
    pfam12341
    Location:417 → 724
    Mcl1_mid; Minichromosome loss protein, Mcl1, middle region
    sd00039
    Location:101 → 137
    7WD40; WD40 repeat [structural motif]
    cl02567
    Location:14 → 301
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
Nucleotide Protein
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