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PRODH2 proline dehydrogenase 2 [ Pan troglodytes (chimpanzee) ]

Gene ID: 469076, updated on 29-Mar-2024

Summary

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Official Symbol
PRODH2provided by VGNC
Official Full Name
proline dehydrogenase 2provided by VGNC
Primary source
VGNC:VGNC:10209
Locus tag
CK820_G0030241
See related
Ensembl:ENSPTRG00000038736
Gene type
protein coding
RefSeq status
MODEL
Organism
Pan troglodytes
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pan
Orthologs
human mouse all
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Genomic context

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See PRODH2 in Genome Data Viewer
Location:
chromosome: 19
Exon count:
10
Annotation release Status Assembly Chr Location
RS_2024_02 current NHGRI_mPanTro3-v2.0_pri (GCF_028858775.2) 20 NC_072418.2 (38926510..38939370, complement)
RS_2023_04 previous assembly NHGRI_mPanTro3-v1.1-hic.freeze_pri (GCF_028858775.1) 19 NC_072417.1 (38926537..38939397, complement)

Chromosome 20 - NC_072418.2Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC104003359 Neighboring gene inactive serine/threonine-protein kinase TEX14-like Neighboring gene NPHS1 adhesion molecule, nephrin Neighboring gene kirre like nephrin family adhesion molecule 2 Neighboring gene amyloid beta precursor like protein 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables FAD binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables proline dehydrogenase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in proline catabolic process to glutamate IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in mitochondrion IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
probable proline dehydrogenase 2; hydroxyproline dehydrogenase
Names
kidney and liver proline oxidase 1
proline dehydrogenase (oxidase) 2
XP_016791214.1
XP_054529307.1
XP_054529308.1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_028858775.2-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

Genomic

  1. NC_072418.2 Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

    Range
    38926510..38939370 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_054673333.1 → XP_054529308.1  hydroxyproline dehydrogenase isoform X3

  2. XM_054673332.1 → XP_054529307.1  hydroxyproline dehydrogenase isoform X2

  3. XM_016935725.2 → XP_016791214.1  hydroxyproline dehydrogenase isoform X1

    UniProtKB/TrEMBL
    A0A2J8QHN7, A0A6D2XVZ6, H2QG46
    Related
    ENSPTRP00000018613.4
    Conserved Domains (2) summary
    PLN02681
    Location:28 → 452
    PLN02681; proline dehydrogenase
    pfam01619
    Location:206 → 439
    Pro_dh; Proline dehydrogenase
Nucleotide Protein
Heading Accession and Version

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