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AGOS_AGR123C AGR123Cp [ Eremothecium gossypii ATCC 10895 ]

Gene ID: 4623091, updated on 16-Nov-2023

Summary

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Gene symbol
AGOS_AGR123C
Gene description
AGR123Cp
Locus tag
AGOS_AGR123C
Gene type
protein coding
RNA name
AGR123Cp
RefSeq status
PROVISIONAL
Organism
Eremothecium gossypii ATCC 10895 (strain: ATCC 10895, culture-collection: ATCC:10895)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Eremothecium
Old locus tag
AGR123C
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Genomic context

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Location:
chromosome: VII
Exon count:
1
Sequence:
Chromosome: VII; NC_005788.4 (1298097..1302365, complement)

Chromosome VII - NC_005788.4Genomic Context describing neighboring genes Neighboring gene AGR121Cp Neighboring gene AGR122Cp Neighboring gene AGR124Cp Neighboring gene AGR125Wp

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_005788.4

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The Ashbya gossypii genome as a tool for mapping the ancient Saccharomyces cerevisiae genome. Dietrich FS, et al. Science, 2004 Apr 9. PMID 15001715

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ATP hydrolysis activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ATP-dependent chromatin remodeler activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables chromatin binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables histone binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in nucleosome organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of chromatin IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Names
AGR123Cp
NP_986789.1
  • Syntenic homolog of Saccharomyces cerevisiae YER164W (CHD1)

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_005788.4 Reference assembly

    Range
    1298097..1302365 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_211851.1 → NP_986789.1  AGR123Cp [Eremothecium gossypii ATCC 10895]

    See identical proteins and their annotated locations for NP_986789.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    Q74ZS5
    Conserved Domains (7) summary
    cd11660
    Location:1153 → 1187
    SANT_TRF; Telomere repeat binding factor-like DNA-binding domains of the SANT/myb-like family
    cd00024
    Location:191 → 228
    CHROMO; Chromatin organization modifier (chromo) domain is a conserved region of around 50 amino acids found in a variety of chromosomal proteins, which appear to play a role in the functional organization of the eukaryotic nucleus. Experimental evidence ...
    cd00046
    Location:376 → 524
    DEXDc; DEAD-like helicases superfamily. A diverse family of proteins involved in ATP-dependent RNA or DNA unwinding. This domain contains the ATP-binding region.
    pfam00176
    Location:359 → 645
    SNF2_N; SNF2 family N-terminal domain
    pfam00271
    Location:674 → 789
    Helicase_C; Helicase conserved C-terminal domain
    pfam00385
    Location:267 → 321
    Chromo; Chromo (CHRromatin Organization MOdifier) domain
    pfam13907
    Location:1319 → 1412
    DUF4208; Domain of unknown function (DUF4208)
Nucleotide Protein
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