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AGOS_AFR007W AFR007Wp [ Eremothecium gossypii ATCC 10895 ]

Gene ID: 4621793, updated on 16-Nov-2023

Summary

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Gene symbol
AGOS_AFR007W
Gene description
AFR007Wp
Locus tag
AGOS_AFR007W
Gene type
protein coding
RNA name
AFR007Wp
RefSeq status
PROVISIONAL
Organism
Eremothecium gossypii ATCC 10895 (strain: ATCC 10895, culture-collection: ATCC:10895)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Eremothecium
Old locus tag
AFR007W
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Genomic context

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Location:
chromosome: VI
Exon count:
1
Sequence:
Chromosome: VI; NC_005787.5 (450058..452616)

Chromosome VI - NC_005787.5Genomic Context describing neighboring genes Neighboring gene AFR005Cp Neighboring gene AFR006Cp Neighboring gene AFR008Cp Neighboring gene AFR009Wp

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_005787.5

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The Ashbya gossypii genome as a tool for mapping the ancient Saccharomyces cerevisiae genome. Dietrich FS, et al. Science, 2004 Apr 9. PMID 15001715

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables cysteine-type deubiquitinase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein deubiquitination IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Names
AFR007Wp
NP_985554.2
  • Syntenic homolog of Saccharomyces cerevisiae YDR069C (DOA4) and YER144C (UBP5)

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_005787.5 Reference assembly

    Range
    450058..452616
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_210908.2 → NP_985554.2  AFR007Wp [Eremothecium gossypii ATCC 10895]

    See identical proteins and their annotated locations for NP_985554.2

    Status: PROVISIONAL

    UniProtKB/Swiss-Prot
    Q754R5
    Conserved Domains (3) summary
    smart00450
    Location:176 → 293
    RHOD; Rhodanese Homology Domain
    cd02674
    Location:489 → 846
    Peptidase_C19R; A subfamily of peptidase C19. Peptidase C19 contains ubiquitinyl hydrolases. They are intracellular peptidases that remove ubiquitin molecules from polyubiquinated peptides by cleavage of isopeptide bonds. They hydrolyze bonds involving the carboxyl ...
    pfam00443
    Location:488 → 846
    UCH; Ubiquitin carboxyl-terminal hydrolase
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q754R5.2

Gene LinkOut

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Molecular Biology Databases
Research Materials