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AGOS_AFR003C AFR003Cp [ Eremothecium gossypii ATCC 10895 ]

Gene ID: 4621788, updated on 16-Nov-2023

Summary

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Gene symbol
AGOS_AFR003C
Gene description
AFR003Cp
Locus tag
AGOS_AFR003C
Gene type
protein coding
RNA name
AFR003Cp
RefSeq status
PROVISIONAL
Organism
Eremothecium gossypii ATCC 10895 (strain: ATCC 10895, culture-collection: ATCC:10895)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Eremothecium
Old locus tag
AFR003C
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Genomic context

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See AGOS_AFR003C in Genome Data Viewer
Location:
chromosome: VI
Exon count:
2
Sequence:
Chromosome: VI; NC_005787.5 (443802..444679, complement)

Chromosome VI - NC_005787.5Genomic Context describing neighboring genes Neighboring gene AFR001Wp Neighboring gene AFR002Cp Neighboring gene ncRNA Neighboring gene AFR004Wp Neighboring gene AFR005Cp

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_005787.5

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The Ashbya gossypii genome as a tool for mapping the ancient Saccharomyces cerevisiae genome. Dietrich FS, et al. Science, 2004 Apr 9. PMID 15001715

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables guanyl-nucleotide exchange factor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables translation elongation factor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in translational elongation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of eukaryotic translation elongation factor 1 complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Names
AFR003Cp
NP_985550.1
  • Syntenic homolog of Saccharomyces cerevisiae YAL003W (EFB1); 1-intron

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_005787.5 Reference assembly

    Range
    443802..444679 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_210904.1 → NP_985550.1  AFR003Cp [Eremothecium gossypii ATCC 10895]

    See identical proteins and their annotated locations for NP_985550.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    Q754R9
    Conserved Domains (3) summary
    pfam00736
    Location:123 → 206
    EF1_GNE; EF-1 guanine nucleotide exchange domain
    pfam10587
    Location:85 → 110
    EF-1_beta_acid; Eukaryotic elongation factor 1 beta central acidic region
    cl02776
    Location:12 → 57
    GST_C_family; C-terminal, alpha helical domain of the Glutathione S-transferase family
Nucleotide Protein
Heading Accession and Version

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