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FRMD4B FERM domain containing 4B [ Pan troglodytes (chimpanzee) ]

Gene ID: 460498, updated on 17-Aug-2024

Summary

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Official Symbol
FRMD4Bprovided by VGNC
Official Full Name
FERM domain containing 4Bprovided by VGNC
Primary source
VGNC:VGNC:1821
Locus tag
CK820_G0004764
See related
Ensembl:ENSPTRG00000015098
Gene type
protein coding
RefSeq status
MODEL
Organism
Pan troglodytes
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pan
Orthologs
human mouse all
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Genomic context

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See FRMD4B in Genome Data Viewer
Location:
chromosome: 2
Exon count:
28
Annotation release Status Assembly Chr Location
RS_2024_02 current NHGRI_mPanTro3-v2.0_pri (GCF_028858775.2) 2 NC_086015.1 (73156963..73530643, complement)
RS_2023_04 previous assembly NHGRI_mPanTro3-v1.1-hic.freeze_pri (GCF_028858775.1) 3 NC_072401.1 (73154566..73529784, complement)

Chromosome 2 - NC_086015.1Genomic Context describing neighboring genes Neighboring gene ubiquitin like modifier activating enzyme 3 Neighboring gene ADP ribosylation factor like GTPase 6 interacting protein 5 Neighboring gene leiomodin 3 Neighboring gene RNA-binding protein 43-like Neighboring gene histone H1.8-like Neighboring gene uncharacterized LOC129143505 Neighboring gene uncharacterized LOC129143504

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in establishment of epithelial cell polarity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in adherens junction IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in bicellular tight junction IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in cytoskeleton IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
FERM domain-containing protein 4B

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_028858775.2-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

Genomic

  1. NC_086015.1 Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

    Range
    73156963..73530643 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_063806908.1 → XP_063662978.1  FERM domain-containing protein 4B isoform X5

    UniProtKB/TrEMBL
    A0A2I3SZI1

  2. XM_009445839.5 → XP_009444114.1  FERM domain-containing protein 4B isoform X4

    See identical proteins and their annotated locations for XP_009444114.1

    UniProtKB/TrEMBL
    A0A2I3SZI1
    Conserved Domains (5) summary
    smart00295
    Location:21 → 206
    B41; Band 4.1 homologues
    cd13191
    Location:202 → 312
    FERM_C_FRMD4A_FRMD4B; FERM domain C-lobe of FERM domain-containing protein 4A and 4B (FRMD4A and 4B)
    pfam00373
    Location:92 → 206
    FERM_M; FERM central domain
    pfam09379
    Location:21 → 70
    FERM_N; FERM N-terminal domain
    pfam11819
    Location:347 → 475
    DUF3338; Domain of unknown function (DUF3338)

  3. XM_063806907.1 → XP_063662977.1  FERM domain-containing protein 4B isoform X4

    UniProtKB/TrEMBL
    A0A2I3SZI1

  4. XM_009445838.4 → XP_009444113.1  FERM domain-containing protein 4B isoform X2

    UniProtKB/TrEMBL
    A0A2I3SZI1, H2RC13
    Related
    ENSPTRP00000056632.2
    Conserved Domains (5) summary
    smart00295
    Location:75 → 260
    B41; Band 4.1 homologues
    cd13191
    Location:256 → 366
    FERM_C_FRMD4A_FRMD4B; FERM domain C-lobe of FERM domain-containing protein 4A and 4B (FRMD4A and 4B)
    pfam00373
    Location:146 → 260
    FERM_M; FERM central domain
    pfam09379
    Location:75 → 124
    FERM_N; FERM N-terminal domain
    pfam11819
    Location:401 → 529
    DUF3338; Domain of unknown function (DUF3338)

  5. XM_516575.9 → XP_516575.3  FERM domain-containing protein 4B isoform X1

    See identical proteins and their annotated locations for XP_516575.3

    UniProtKB/TrEMBL
    A0A2I3SZI1, A0A2I3TEC6, A0A2J8P752, A0A6D2WSF2
    Related
    ENSPTRP00000087552.1
    Conserved Domains (3) summary
    smart00295
    Location:75 → 260
    B41; Band 4.1 homologues
    cd13191
    Location:256 → 366
    FERM_C_FRMD4A_FRMD4B; FERM domain C-lobe of FERM domain-containing protein 4A and 4B (FRMD4A and 4B)
    pfam11819
    Location:395 → 528
    DUF3338; Domain of unknown function (DUF3338)

  6. XM_016941481.4 → XP_016796970.1  FERM domain-containing protein 4B isoform X3

    UniProtKB/TrEMBL
    A0A2I3SZI1

  7. XM_063806906.1 → XP_063662976.1  FERM domain-containing protein 4B isoform X4

    UniProtKB/TrEMBL
    A0A2I3SZI1
Nucleotide Protein
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