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NFIA_035410 cactin, putative [ Aspergillus fischeri NRRL 181 ]

Gene ID: 4593101, updated on 17-May-2024

Summary

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Gene symbol
NFIA_035410
Gene description
cactin, putative
Primary source
FungiDB:NFIA_035410
Locus tag
NFIA_035410
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Aspergillus fischeri NRRL 181 (strain: NRRL 181, type-material: culture from neotype of Aspergillus fischeri)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Eurotiomycetes; Eurotiomycetidae; Eurotiales; Aspergillaceae; Aspergillus; Aspergillus subgen. Fumigati
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Genomic context

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See NFIA_035410 in Genome Data Viewer
Location:
chromosome: Unknown
Exon count:
5

NW_001509772.1Genomic Context describing neighboring genes Neighboring gene 60S ribosomal protein L34 Neighboring gene forkhead domain protein Neighboring gene hypothetical protein Neighboring gene WD repeat protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_001509772.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in mRNA cis splicing, via spliceosome IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of spliceosomal complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
cactin, putative
XP_001265870.1
  • encoded by transcript NFIA_035410A
    predicted by EVM

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NW_001509772.1 Reference assembly

    Range
    846129..848039 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_001265869.1 → XP_001265870.1  cactin, putative [Aspergillus fischeri NRRL 181]

    See identical proteins and their annotated locations for XP_001265870.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A1CZ03
    Conserved Domains (2) summary
    pfam09732
    Location:419 → 556
    CactinC_cactus; Cactus-binding C-terminus of cactin protein
    pfam10312
    Location:67 → 251
    Cactin_mid; Conserved mid region of cactin
Nucleotide Protein
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