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SH2D1B SH2 domain containing 1B [ Pan troglodytes (chimpanzee) ]

Gene ID: 457464, updated on 17-Aug-2024

Summary

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Official Symbol
SH2D1Bprovided by VGNC
Official Full Name
SH2 domain containing 1Bprovided by VGNC
Primary source
VGNC:VGNC:1545
Locus tag
CK820_G0027894
See related
Ensembl:ENSPTRG00000024320
Gene type
protein coding
RefSeq status
MODEL
Organism
Pan troglodytes
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pan
Orthologs
human all
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Genomic context

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See SH2D1B in Genome Data Viewer
Location:
chromosome: 1
Exon count:
10
Annotation release Status Assembly Chr Location
RS_2024_02 current NHGRI_mPanTro3-v2.0_pri (GCF_028858775.2) 1 NC_072398.2 (86634642..86727124)
RS_2023_04 previous assembly NHGRI_mPanTro3-v1.1-hic.freeze_pri (GCF_028858775.1) 1 NC_072398.1 (144622609..144715093, complement)

Chromosome 1 - NC_072398.2Genomic Context describing neighboring genes Neighboring gene cytochrome b-c1 complex subunit 7-like Neighboring gene U2AF homology motif kinase 1 Neighboring gene nitric oxide synthase 1 adaptor protein Neighboring gene spermatogenesis associated 46 Neighboring gene microRNA mir-556

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in negative regulation of bone resorption IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in negative regulation of neutrophil differentiation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in negative regulation of signal transduction IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of B cell differentiation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of immune response IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
SH2 domain-containing protein 1B

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_028858775.2-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

Genomic

  1. NC_072398.2 Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

    Range
    86634642..86727124
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_513952.8 → XP_513952.3  SH2 domain-containing protein 1B

    UniProtKB/TrEMBL
    A0A2J8LM91, A0A6D2X4S7, H2R3S1
    Related
    ENSPTRP00000045980.4
    Conserved Domains (1) summary
    cd10342
    Location:1 → 103
    SH2_SAP1; Src homology 2 (SH2) domain found in SLAM-associated protein (SAP)1

RNA

  1. XR_008549034.2 RNA Sequence

  2. XR_008549035.2 RNA Sequence

  3. XR_008549032.2 RNA Sequence

  4. XR_010151986.1 RNA Sequence

  5. XR_001710677.4 RNA Sequence

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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Molecular Biology Databases
Research Materials