U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

AP4B1 adaptor related protein complex 4 subunit beta 1 [ Pan troglodytes (chimpanzee) ]

Gene ID: 457138, updated on 3-Apr-2024

Summary

Go to the top of the page Help
Official Symbol
AP4B1provided by VGNC
Official Full Name
adaptor related protein complex 4 subunit beta 1provided by VGNC
Primary source
VGNC:VGNC:6715
Locus tag
CK820_G0044970
See related
Ensembl:ENSPTRG00000001127
Gene type
protein coding
RefSeq status
MODEL
Organism
Pan troglodytes
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pan
Orthologs
human mouse all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
Location:
chromosome: 1
Exon count:
11
Annotation release Status Assembly Chr Location
RS_2024_02 current NHGRI_mPanTro3-v2.0_pri (GCF_028858775.2) 1 NC_072398.2 (111122990..111133114, complement)
RS_2023_04 previous assembly NHGRI_mPanTro3-v1.1-hic.freeze_pri (GCF_028858775.1) 1 NC_072398.1 (120216625..120226749)

Chromosome 1 - NC_072398.2Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC129137549 Neighboring gene protein tyrosine phosphatase non-receptor type 22 Neighboring gene BCL2 like 15 Neighboring gene uncharacterized LOC134810580 Neighboring gene DNA cross-link repair 1B Neighboring gene homeodomain interacting protein kinase 1 Neighboring gene olfactomedin like 3

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Major chimpanzee-specific structural changes in sperm development-associated genes. Kim RN, et al. Funct Integr Genomics, 2011 Sep. PMID 21484476

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables clathrin binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in intracellular protein transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in vesicle-mediated transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of clathrin adaptor complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of membrane coat IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
AP-4 complex subunit beta-1
Names
adaptor related protein complex 4 beta 1 subunit

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: GCF_028858775.2-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

Genomic

  1. NC_072398.2 Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

    Range
    111122990..111133114 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_003949513.3 → XP_003949562.1  AP-4 complex subunit beta-1 isoform X2

    See identical proteins and their annotated locations for XP_003949562.1

    UniProtKB/TrEMBL
    A0A2I3S1V0, G2HGP3
    Related
    ENSPTRP00000070558.1
    Conserved Domains (4) summary
    pfam01602
    Location:37 → 450
    Adaptin_N; Adaptin N terminal region
    pfam09066
    Location:546 → 655
    B2-adapt-app_C; Beta2-adaptin appendage, C-terminal sub-domain
    pfam12717
    Location:37 → 176
    Cnd1; non-SMC mitotic condensation complex subunit 1
    sd00044
    Location:46 → 74
    HEAT; HEAT repeat [structural motif]

  2. XM_054669591.2 → XP_054525566.1  AP-4 complex subunit beta-1 isoform X5

    UniProtKB/TrEMBL
    A0A2I3SAV3, A0A2J8JS38, A0A6D2WA92

  3. XM_016925415.4 → XP_016780904.1  AP-4 complex subunit beta-1 isoform X3

    UniProtKB/TrEMBL
    G2HGP3
    Conserved Domains (2) summary
    pfam01602
    Location:9 → 432
    Adaptin_N; Adaptin N terminal region
    pfam09066
    Location:528 → 637
    B2-adapt-app_C; Beta2-adaptin appendage, C-terminal sub-domain

  4. XM_024347899.3 → XP_024203667.1  AP-4 complex subunit beta-1 isoform X4

    UniProtKB/TrEMBL
    G2HGP3
    Conserved Domains (3) summary
    sd00044
    Location:86 → 113
    HEAT; HEAT repeat [structural motif]
    pfam09066
    Location:527 → 636
    B2-adapt-app_C; Beta2-adaptin appendage, C-terminal sub-domain
    cl26317
    Location:9 → 468
    Adaptin_N; Adaptin N terminal region

  5. XM_054669574.2 → XP_054525549.1  AP-4 complex subunit beta-1 isoform X1

    UniProtKB/TrEMBL
    A0A2J8JS52, A0A6D2Y2W3, H2PZP9
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.