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SPTBN4 spectrin beta, non-erythrocytic 4 [ Pan troglodytes (chimpanzee) ]

Gene ID: 456040, updated on 29-Mar-2024

Summary

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Official Symbol
SPTBN4provided by VGNC
Official Full Name
spectrin beta, non-erythrocytic 4provided by VGNC
Primary source
VGNC:VGNC:14756
Locus tag
CK820_G0030471
See related
Ensembl:ENSPTRG00000011000
Gene type
protein coding
RefSeq status
MODEL
Organism
Pan troglodytes
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pan
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 19
Exon count:
38
Annotation release Status Assembly Chr Location
RS_2024_02 current NHGRI_mPanTro3-v2.0_pri (GCF_028858775.2) 20 NC_072418.2 (43553871..43662363)
RS_2023_04 previous assembly NHGRI_mPanTro3-v1.1-hic.freeze_pri (GCF_028858775.1) 19 NC_072417.1 (43553867..43662388)

Chromosome 20 - NC_072418.2Genomic Context describing neighboring genes Neighboring gene SERTA domain containing 3 Neighboring gene biliverdin reductase B Neighboring gene SH3KBP1 binding protein 1 Neighboring gene latent transforming growth factor beta binding protein 4

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables actin filament binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables phospholipid binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables structural constituent of cytoskeleton IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in actin cytoskeleton organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in central nervous system projection neuron axonogenesis IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cell junction IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in cell projection IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in cortical actin cytoskeleton IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of spectrin IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
spectrin beta chain, non-erythrocytic 4

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_028858775.2-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

Genomic

  1. NC_072418.2 Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

    Range
    43553871..43662363
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_016935994.4 → XP_016791483.2  spectrin beta chain, non-erythrocytic 4 isoform X1

  2. XM_054673188.2 → XP_054529163.1  spectrin beta chain, non-erythrocytic 4 isoform X2

  3. XM_054673189.2 → XP_054529164.1  spectrin beta chain, non-erythrocytic 4 isoform X3

  4. XM_063801699.1 → XP_063657769.1  spectrin beta chain, non-erythrocytic 4 isoform X1

RNA

  1. XR_010153874.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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